Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1836 |
Symbol | ispG |
ID | 6123500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2041435 |
End bp | 2042751 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638405 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_001765119 |
Protein GI | 170733172 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.932334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTAT CGATGCAATC CGAAGCTCAA TCCCCACGCA GCAGTCAGAT TTGTTCAACC GAGCCGGTGT TCGGCGGGCA TCAGCCGCGC CGCGTATCGC ATGCGGTGGA TGTCCGCTGG GGCGGGCAAC TCGTGACGAT CGGCGGCGAC GCGCCGGTGC GCGTGCAGTC GATGACGAAT ACCGACACCG CCGATGCGAT CGGCACGGCG ATCCAGATCA AGGAACTCGC GAATGCGGGC TCCGAGCTGG TGCGCATCAC GGTCAACACG CCCGAAGCCG CGGCCGCCGT GCCGGCGATT CGCGAGCAGC TCGACCGGAT GGGCGTGACC GTGCCGCTCG TCGGCGATTT CCACTACAAC GGCCACCTGC TGCTGCGCGA CTATCCGGGC TGCGCCGAGT CGCTGTCGAA GTACCGGATC AACCCCGGTA ACGTCGGTCA GGGTGCGAAG CGCGACACGC AGTTCGCGCA GATGATCGAG GCTGCGGCGA AGTACGACAA GCCGGTACGG ATCGGCGTGA ACTGGGGCAG CCTCGACCAG GACCTGCTCG CACGCATGAT GGACGAGAAC GGCGCGCGCG CGCAGCCGTG GGACGCGCAG AGCGTGATGT ACGAGGCGCT GATTCAGTCG GCGATCGGCT CGGCCGAACG CGCGGTCGAG CTCGGCCTTG GCCGTGACCG CATCGTGTTG TCGTGCAAGG TCAGCGGCGT GCAGGACCTG ATCGCCGTGT ACCGCGAACT CGGCCGCCGC TGCGGCTTCG CGCTGCACCT CGGGCTGACC GAGGCCGGCA TGGGTTCGAA GGGCATCGTC GCGTCGACGG CCGCGCTCGG CGTGTTGCTG CAGGAAGGGA TCGGCGACAC GATCCGCATC TCGCTGACGC CGGAGCCGGG CGCGTCGCGC ACCGGCGAGG TGATCGTCGG CCAGGAAATC CTGCAGACGA TGGGCCTGCG CTCGTTCGCG CCGATGGTGA TCGCGTGCCC GGGCTGCGGC CGTACGACGA GCACGCTGTT CCAGGAACTC GCGATGCAGA TCCAGACCTA CCTGCGCGAG CAGATGCCGG TCTGGCGCAA GGAATATCCG GGCGTCGAGA AGATGAACGT CGCGGTGATG GGCTGCATCG TCAATGGCCC GGGCGAATCG AAGCACGCGA ACATCGGCAT CAGCCTGCCG GGTTCGGGCG AGAACCCGGC AGCACCTGTC TTCATCGACG GCGAGAAGGT CAAGACGCTG CGCGGCGAGC GGATCGCCGA GGAATTCCAG CAGATCGTCA GCGACTACGT CGCACGCAAT TACGGCCGCA CCGAGGCCCT GAACTAA
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Protein sequence | MDLSMQSEAQ SPRSSQICST EPVFGGHQPR RVSHAVDVRW GGQLVTIGGD APVRVQSMTN TDTADAIGTA IQIKELANAG SELVRITVNT PEAAAAVPAI REQLDRMGVT VPLVGDFHYN GHLLLRDYPG CAESLSKYRI NPGNVGQGAK RDTQFAQMIE AAAKYDKPVR IGVNWGSLDQ DLLARMMDEN GARAQPWDAQ SVMYEALIQS AIGSAERAVE LGLGRDRIVL SCKVSGVQDL IAVYRELGRR CGFALHLGLT EAGMGSKGIV ASTAALGVLL QEGIGDTIRI SLTPEPGASR TGEVIVGQEI LQTMGLRSFA PMVIACPGCG RTTSTLFQEL AMQIQTYLRE QMPVWRKEYP GVEKMNVAVM GCIVNGPGES KHANIGISLP GSGENPAAPV FIDGEKVKTL RGERIAEEFQ QIVSDYVARN YGRTEALN
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