| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1822 |
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| Symbol | |
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| ID | 6123486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2024397 |
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| End bp | 2026844 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638391 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001765105 |
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| Protein GI | 170733158 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.569031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAT GCCCCGCTTC ATTCACCCGC GGCCTCTGGC CCGTCGGGCC CGCCGGGCAG
CCCGCCGCTC AGGGCCTGCC GGCCCGCGCC GCGATTTCAG CAGGCAGACA GACCATCCAC
GACATGACGG AAACCGTAGC ACTCAAGATC GTACAGCGCA TCGCCACCGA ACTGTCCGTC
CAGCCGCGCC AGGTCGCGGC GGCCGTGCAA CTCCTCGACG AAGGCTCGAC CGTTCCGTTC
ATTGCCCGGT ACCGCAAGGA AGTGACCGGC AACCTGGACG ACACGCAGCT GCGCAACCTC
GAGGAACGCC TCCTGTATCT GCGCGAACTC GAGGATCGAC GCGCCGCGAT CCTGTCGAGC
ATCGACGAAC AGGGCAAGCT GACCGACGAA CTGCGTGCCG CGATCGACGC GGCCGACAGC
AAACAGGTGC TCGAAGACCT TTATCTGCCG TACAAGCCGA AGCGCCGCAC GCGTGCACAG
ATCGCCCGCG AAGCCGGCCT CGAGCCGCTC GCGCAGGCGC TGCTCGCGAA CCCGCTGCTC
GACCCGCAAG CCGAGGCGGC CGCGTATGTC GACGCCGACA AGGGCGTAGC CGACGTGAAA
GCCGCGCTCG ACGGCGCGCG CGACATCCTG TCCGAACAGT TCGGCGAGAC GGCGGAACTG
CTCGGCAAGC TGCGCGACTA CCTGCACAAC CAGGGCGTCG TGTCGTCGGC CGTCGTCGAG
GGCAAGGAAA ACGAGGAAGG CGAGAAATTC CGCGACTATT ACGACTACGC GGAAACGATC
AAGACCGTGC CGTCGCACCG TGCGCTCGCG CTGTTCCGCG GCCGCAACGC CGGCGTGCTG
ACGATCAAGC TCGGCCTCGG CGAAGAGCTC GACGCGCAGG TGCCGCATCC CGGCGAGGCG
ATGATCGCGC GCCATTTCGG CATCGCGAAC CAGAATCGCC CGGCCGACAA ATGGCTGTCC
GACGTCTGCC GCTGGTGCTG GCGCGTGAAG GTGCAGCCGC ATATCGAGAA CGAACTGCTC
ACGCAGCTGC GCGAAACGGC CGAAACCGAA GCGATCCGCG TGTTTGCGCG CAACCTGAAC
GACCTGCTGC TGGCCGCGCC GGCCGGCCCG AAGGCCGTGA TCGGCCTCGA CCCCGGCCTG
CGCACGGGCG TGAAGGTCGC GGTCGTCGAC CGCACCGGCA AGGTGCTCGC GACCGACACG
ATCTACCCGC ACGAGCCGCG CCGCGACTGG GACGGCTCGA TCGCGAAACT CGCGCGCATC
GCCGCGCAGA CGCAGGCCGA GCTGATCAGC ATCGGCAACG GCACCGCGTC GCGCGAAACC
GACAAGCTCG CGAGCGAATT GATCGCGAAA CACCCGGAGC TGCGGCTCCA GAAGATCGTC
GTGTCGGAAG CCGGCGCGTC GGTCTACTCT GCGTCCGAGC TCGCCGCGAA GGAATTCCCG
GAGCTCGACG TATCGCTGCG CGGCGCCGTG TCGATCGCCC GCCGCCTGCA GGACCCGCTC
GCCGAGCTCG TGAAGATCGA GCCGAAGGCG ATCGGCGTCG GCCAGTACCA GCACGACGTG
AACCAGCGCG AACTCGCCCG CTCGCTCGAC GCGGTCGTCG AGGATTGCGT GAACGCGGTC
GGCGTCGACG CGAACACCGC GTCGGCCCCG CTGCTCGCCC GCGTGTCGGG ACTGAACGCG
ACGCTCGCGC GCAACATCGT CGACTATCGC GATGCAAACG GCCCGTTCCC GTCGCGCGAG
CACCTGCGCA AGGTGCCGCG CCTCGGCGAC AAGACTTTCG AACAGGCCGC CGGCTTCCTG
CGCATCAACG GCGGCGAGAA CCCGCTCGAC CGCTCGTCGG TTCACCCGGA AGCGTATCCG
GTCGTCGAGC GGATGCTCGC GAAGATCAAC AAGCGCATCG ACGACGTGCT CGGCAACCGC
GAAGCGCTGT CGGGTCTGTC ACCGACGGAA TTTGTTGACG AACGTTTCGG CCTGCCGACC
GTGCGCGACA TCCTGGCCGA ACTGGAGAAA CCGGGGCGCG ATCCGCGTCC GGAATTCAAG
ACGGCCACGT TCCGCGAAGG CGTCGAGAAG GTCTCGGATC TCGTGCCGGG CATGACGCTC
GAAGGCGTCG TGACGAACGT CGCGGCGTTC GGCGCGTTCG TGGATATCGG CGTGCACCAG
GACGGCCTCG TCCACGTGTC GGCAATGTCG ACGAAGTTCA TCAAGGACCC GCACGAAGTC
GTGAAGGCCG GCCAGGTCGT CAAGGTGAAG GTGATCGACG TCGACGTGAA GCGCCAGCGC
ATCGCGCTGA CGATGCGCCT CGACGACGAC GCGGCAGCGC CCGGCATGAC GTCGCGCGGC
GGCCCGGATC GCGGCAATGC GGGGCGCGGC GCCGCCCGCC CGCAGCGTTC GCGCGAACCG
GAGCCGGCCG GCGCGATGGC CGCGGCATTC GCGAAGCTGA AGCGCTGA
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| Protein sequence | MAKCPASFTR GLWPVGPAGQ PAAQGLPARA AISAGRQTIH DMTETVALKI VQRIATELSV
QPRQVAAAVQ LLDEGSTVPF IARYRKEVTG NLDDTQLRNL EERLLYLREL EDRRAAILSS
IDEQGKLTDE LRAAIDAADS KQVLEDLYLP YKPKRRTRAQ IAREAGLEPL AQALLANPLL
DPQAEAAAYV DADKGVADVK AALDGARDIL SEQFGETAEL LGKLRDYLHN QGVVSSAVVE
GKENEEGEKF RDYYDYAETI KTVPSHRALA LFRGRNAGVL TIKLGLGEEL DAQVPHPGEA
MIARHFGIAN QNRPADKWLS DVCRWCWRVK VQPHIENELL TQLRETAETE AIRVFARNLN
DLLLAAPAGP KAVIGLDPGL RTGVKVAVVD RTGKVLATDT IYPHEPRRDW DGSIAKLARI
AAQTQAELIS IGNGTASRET DKLASELIAK HPELRLQKIV VSEAGASVYS ASELAAKEFP
ELDVSLRGAV SIARRLQDPL AELVKIEPKA IGVGQYQHDV NQRELARSLD AVVEDCVNAV
GVDANTASAP LLARVSGLNA TLARNIVDYR DANGPFPSRE HLRKVPRLGD KTFEQAAGFL
RINGGENPLD RSSVHPEAYP VVERMLAKIN KRIDDVLGNR EALSGLSPTE FVDERFGLPT
VRDILAELEK PGRDPRPEFK TATFREGVEK VSDLVPGMTL EGVVTNVAAF GAFVDIGVHQ
DGLVHVSAMS TKFIKDPHEV VKAGQVVKVK VIDVDVKRQR IALTMRLDDD AAAPGMTSRG
GPDRGNAGRG AARPQRSREP EPAGAMAAAF AKLKR
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