Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1818 |
Symbol | |
ID | 6123482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2020058 |
End bp | 2020882 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641638387 |
Product | DNA uptake lipoprotein-like protein |
Protein accession | YP_001765101 |
Protein GI | 170733154 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.281212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATT CGACCAAACG CACGGCCAGA ACCGTCGCCG CCCGGGCTGC GGCGGTAGCG GCCGCGGCCC TCATCGCCGG CTGCCACGGC TTGCCGCAGA AGCAGGACGA GACGGCTACC TGGTCGAACA ACAAATTATA CTCAGAGGCC CAGGACGCAC TGTCCGGCGG CGACTGGGGC AAGTGCGCGA AATATTTCGA ATCGCTGCAA GGCCGCGATC CGTTCGGCCA TTTCGCGCAG CAGGCGCAGA TCAACGTTGC ATACTGCAAC TGGAAGGATA ACGAAGCAGC AGCGGCCGAC CAGGCCGTCG ATCGCTTCAT CCAGCTCCAC CCCGATCATC CGGACATCCC GTACGCGTAC TACCTGAAGG GGATGATCCA CTTCAACGAC GATCTCGGCC TGTTCGGGCG CTTCTCCGGC CAGGACATGA GCGAGCGCGA TCCGCAGGCG CTGCGCGAAT CGTACGATGC GTTCAAGGTC GTGGTCGATC GCTTCCCGAA GAGCAAGTAC GCGCCCGATG CGGCCGCGCG GATGCGCTAC ATCGTCAACG CGCTCGCGTC GCACGAAGTG CACGCGGCCG ACTACTACTA CCGTCGCGGC GCGTATGTCG CGGCCATCAA CCGCGCGCAG CTCGCGATCA AGGACTACAA GGGCGCGCCG GCGATCGAGG ATGCGCTGCA CATCATGATC CTGTCGTACG GCAAGCTGAA CCAGCCGGAA CTCGCCGAGG ACACCAAGCG CGTACTCGCG GGCACGTTCC CCGACAGCCC GTACGTGACG GGCCATTCGC GCCCCGGTGC GAAGAAGTCG TGGTGGCAGT TCTGA
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Protein sequence | MMNSTKRTAR TVAARAAAVA AAALIAGCHG LPQKQDETAT WSNNKLYSEA QDALSGGDWG KCAKYFESLQ GRDPFGHFAQ QAQINVAYCN WKDNEAAAAD QAVDRFIQLH PDHPDIPYAY YLKGMIHFND DLGLFGRFSG QDMSERDPQA LRESYDAFKV VVDRFPKSKY APDAAARMRY IVNALASHEV HAADYYYRRG AYVAAINRAQ LAIKDYKGAP AIEDALHIMI LSYGKLNQPE LAEDTKRVLA GTFPDSPYVT GHSRPGAKKS WWQF
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