Gene Bcenmc03_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1816 
Symbol 
ID6123480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2017962 
End bp2018801 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID641638385 
Producthypothetical protein 
Protein accessionYP_001765099 
Protein GI170733152 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.570044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC TGGCGCCGTT GACGTGGCAG GACTGTGTGC AACCCGACTG GCAGGTGTCG 
CCGCGCGTGC GCGCGCTGAT CACGACGCGC GACGGTGGTG TGAGCGAGGG CCCGTACGGG
CGCTGGCAGG ACGGTGTGGC GCTGCCGGGC GGGATGAATC TCGGCCTGCA TACCGGTGAC
GATCCCGACC ATGTCGCGGT CAATCGCGCA CGCGTGCTCG CCTTCGCCGG GCAGTCGAGC
GCCGCATGGC TCGAGCAGGT TCACGGTGCG CGGATCGTGC AGGCGGACGA GGTGATCGCC
GCGGCGCCTG CGGCGACGGC GCCGGTGCAG GCCGACGCGA GCGTCACGAA CCAGGCGGGC
GCCGTCTGCG TGGTGATGGT GGCCGATTGC CTGCCCGTGC TGCTGTGCGA CGCGCAGGGC
CGCGCGGTCG GCGCCGCGCA TGCGGGCTGG CGCGGGCTTG CGGCCGGCAT CGTCGAGCAG
ACGGCCGCAC GCGTCGCGGC GCTCGCGGGC GGCGCGACGG ACACGCTGCA TGCGTATCTC
GGCCCGGCGA TCGGCCCGCG GGCGTTCGAG GTCGGCGCCG AGGTGCGCGA CGCGTTTCTC
GACACGGCTG CGCAGTCGGA GCATGATGAA ACCCGTCATG CGTTCGTTGC CATCGACGGC
GCGCCCGGCA AGTTTCTTGC CGATCTCTAC GCGCTCGCGC GCCTGCGACT CGTGCGAGCA
GGCGTGGCGC ACGTGAGCGG CGGGACGGCT TGCACGGTCG CCGAACCTGC GCGCTTCTAT
TCGTACCGGC GCGACCGTGT GACGGGCCGC ATGGCCGCGG CAATCTGGCT GGCCGATTGA
 
Protein sequence
MTNLAPLTWQ DCVQPDWQVS PRVRALITTR DGGVSEGPYG RWQDGVALPG GMNLGLHTGD 
DPDHVAVNRA RVLAFAGQSS AAWLEQVHGA RIVQADEVIA AAPAATAPVQ ADASVTNQAG
AVCVVMVADC LPVLLCDAQG RAVGAAHAGW RGLAAGIVEQ TAARVAALAG GATDTLHAYL
GPAIGPRAFE VGAEVRDAFL DTAAQSEHDE TRHAFVAIDG APGKFLADLY ALARLRLVRA
GVAHVSGGTA CTVAEPARFY SYRRDRVTGR MAAAIWLAD