Gene Bcenmc03_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1798 
Symbol 
ID6123464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1999908 
End bp2000609 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID641638369 
ProductABC transporter related 
Protein accessionYP_001765083 
Protein GI170733136 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.394271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCT CCACCGGCCT CATCGACGCG CAGCACATCA CGCGGCGCGA CGCCAGCAGC 
GGCAAGACGC TGCTCGCCCC GACCGATTTC AGTCTCACCG CGGGATCGCG AATTGCTATC
ACCGGACCAT CCGGGTCGGG CAAGAGCGTG CTGCTGCGCG CGCTCGCGCT GCTCGATCCG
CTCGACGGCG GCAGCCTCCT GTGGCGCGGC CGCCGGATCC GGCGCAGCGC GATTCCGCGC
TACCGGCGCA GCGTCGCGTA TGTCCGTCAG CGCCCCGCGC AGATGGACGG CACCGTCGAA
GCGCAGTTGC GCTACCCGTA TTCGCTCGCG ATCTATCGCG ACGTCGCGTT CGACCGCGCC
CGCGCCGAAG CGCTCGCCGC GCAGGCCGGC CGCGGCGCCG ATTTTCTCGA CAAGCGCGCG
AGCGACCTGT CCGGCGGCGA AGCGCAGATC ACCGCGCTGC TGCGCGTGCT GCAACTCGAT
CCCGACGTGC TGCTGCTCGA CGAGCCGACC TCCGCGCTCG ATCCCGAATC GGCGCGCGCG
ATCGAAGCGC TCGTCGGTGC GTGGTTCGAC GCGGCGCCCG ATGCGCGCGC CTATATGTGG
ATCTCGCACG ATCCGGCCCA GGCCGCACGG ATCGCCACGA TGCAGTTCGT GATGCAGGCC
GGCGTGCTGC ACGCGGCCCA CCCGACGGAG GCTGCGCAAT GA
 
Protein sequence
MTSSTGLIDA QHITRRDASS GKTLLAPTDF SLTAGSRIAI TGPSGSGKSV LLRALALLDP 
LDGGSLLWRG RRIRRSAIPR YRRSVAYVRQ RPAQMDGTVE AQLRYPYSLA IYRDVAFDRA
RAEALAAQAG RGADFLDKRA SDLSGGEAQI TALLRVLQLD PDVLLLDEPT SALDPESARA
IEALVGAWFD AAPDARAYMW ISHDPAQAAR IATMQFVMQA GVLHAAHPTE AAQ