| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1792 |
|---|
| Symbol | |
|---|
| ID | 6123459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1991968 |
|---|
| End bp | 1992813 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641638364 |
|---|
| Product | integrase catalytic region |
|---|
| Protein accession | YP_001765078 |
|---|
| Protein GI | 170733131 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.540172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCAGG TCTGCGACGT TCTCGGTGTA GCGCGCTCGA ACATGGCGGC AAGGCTTGCA
AGACCGGCAG ATTGGCTGGA TGGACGTAGT GCCAGGAAGA CGGACGATGC CGGACTGGTG
GAAGAGATTC GGCAGACCGT CGCTGAGCTG CCGAGCTACG GCTACCGCCG CGTTTGGGGC
ATGTTGCGCC GCGAGCGGGA GCGCCGGGGT ATCGCTCCCG TGAATGCCAA ACGCGTGTAT
CGGGTGATGC GCGTTCACGG CTTGCTGCTA CAACGCCGGC CCTCTCCACC ACGGCCGCAG
CGTCGGCACG ATGGCAAGGT CGCAGTGGCT AAGAGCAACC AGCGCTGGTG TTCTGACGGC
TTCGAGTTTC GTTGCGACAA CGGCGAACCG CTGCGCGTCA CGTTCGCTCT AGATTGCTGT
GACCGGGAAG CGTTGAGCTG GGCGGCAACG ACTGGCGGCC ACAGCGGCGA CGTGGTGCGT
GATGTCATGC TGGCAGCCGT TGAGAACCGC TTTGGCAACG TCCTGAAGGC TCCGACGGAA
ATCGAATGGC TGACGGACAA CGGCTCGGGC TATACGGCGG AAAAGACCAG GGTCTTCGCG
TCTGGCATTG GCCTGAAGCC ATTGACCACA CCTGTCTGCA GCCCGCAAAG TAACGGCATG
GCAGAAAGCT TCGTGAAGAC GATGAAGCGT GACTACGTGG GGTTCATGCC CAAGCCAGAC
GCCGCGAGCG CAGCGCGCAA TCTCGCTATC GCGTTCGAGC ATTACAACGA GAAGCATCCG
CATAGCGCGT TGAAGTATCG CTCTCCACGT GAGTTCAGGC GAACCTTGGC CAGGGAGGGA
GTCTGA
|
|---|
| Protein sequence | MKQVCDVLGV ARSNMAARLA RPADWLDGRS ARKTDDAGLV EEIRQTVAEL PSYGYRRVWG
MLRRERERRG IAPVNAKRVY RVMRVHGLLL QRRPSPPRPQ RRHDGKVAVA KSNQRWCSDG
FEFRCDNGEP LRVTFALDCC DREALSWAAT TGGHSGDVVR DVMLAAVENR FGNVLKAPTE
IEWLTDNGSG YTAEKTRVFA SGIGLKPLTT PVCSPQSNGM AESFVKTMKR DYVGFMPKPD
AASAARNLAI AFEHYNEKHP HSALKYRSPR EFRRTLAREG V
|
|---|
| |