Gene Bcenmc03_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1786 
Symbol 
ID6123455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1987261 
End bp1988013 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content60% 
IMG OID641638360 
Productintegrase catalytic region 
Protein accessionYP_001765074 
Protein GI170733127 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.552825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCC ATCTCGGCGA GTTCCGCCTG TACTCGATGT GCCGGGTCCT TGGCGTGCAT 
CGTAGCGGCT ATTACGTCTG GCAGCGGCAG ACAGTCGGGG CCCGCAAGCG TGAGGATGAG
CGATTGCTCG GTCTGATCAA GCATGCGTGG CTGGCCAGCG GCGGCGTCTA TGGCTACCGC
AAGGTCACGA TGGATTTGCG TGAATCGGGC GAAACGTGCA GCCGTCACCG CGTCCATCGC
CTCATGAGAG GCGAAGGTCT GCGGGCAGAA GTGGGCTATG GCAGCAAGCC CCGCTATCGG
GGTGGTCCGG TCGGCGTAAT CGCCAACGTG TTGAACCGTG AGTTCGCGCC AACCGCACCG
AACCGGGTCT GGGTAACGGA CATCACGTAC ATCCGGACCT ACGAGGGCTG GCTGTATCTG
GCGGCTGTTA TGGATCTGTA CTCGCGCCAG ATCGTCGGTT GGGCTACGCG CTCGACGATG
ACCAGCGATC TGGTTTTACA GGCGCTGTTG GCTGCGGTTT GGAAACGCAA ACCGGGACCC
GGTGTCATGG TGCATTCCGA CCAGGGCAGT CAATTCACGA GCGATGACTG GCAGTCATTC
CTGAAGGCAC ACCATATGGT GCCAAGCATG AGTCGGCGCG GTAATTGCCA CGACAATGCC
GTGGCCGAGA GCTTCTTCAG TGCCCTAAAG AAGGAGCGAA TCAAGCGGCG CATCTATCCG
GAGCCTATCC GAACCTTTGT GTGTGAGGCA TAA
 
Protein sequence
MRAHLGEFRL YSMCRVLGVH RSGYYVWQRQ TVGARKREDE RLLGLIKHAW LASGGVYGYR 
KVTMDLRESG ETCSRHRVHR LMRGEGLRAE VGYGSKPRYR GGPVGVIANV LNREFAPTAP
NRVWVTDITY IRTYEGWLYL AAVMDLYSRQ IVGWATRSTM TSDLVLQALL AAVWKRKPGP
GVMVHSDQGS QFTSDDWQSF LKAHHMVPSM SRRGNCHDNA VAESFFSALK KERIKRRIYP
EPIRTFVCEA