Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1786 |
Symbol | |
ID | 6123455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1987261 |
End bp | 1988013 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641638360 |
Product | integrase catalytic region |
Protein accession | YP_001765074 |
Protein GI | 170733127 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.552825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCCC ATCTCGGCGA GTTCCGCCTG TACTCGATGT GCCGGGTCCT TGGCGTGCAT CGTAGCGGCT ATTACGTCTG GCAGCGGCAG ACAGTCGGGG CCCGCAAGCG TGAGGATGAG CGATTGCTCG GTCTGATCAA GCATGCGTGG CTGGCCAGCG GCGGCGTCTA TGGCTACCGC AAGGTCACGA TGGATTTGCG TGAATCGGGC GAAACGTGCA GCCGTCACCG CGTCCATCGC CTCATGAGAG GCGAAGGTCT GCGGGCAGAA GTGGGCTATG GCAGCAAGCC CCGCTATCGG GGTGGTCCGG TCGGCGTAAT CGCCAACGTG TTGAACCGTG AGTTCGCGCC AACCGCACCG AACCGGGTCT GGGTAACGGA CATCACGTAC ATCCGGACCT ACGAGGGCTG GCTGTATCTG GCGGCTGTTA TGGATCTGTA CTCGCGCCAG ATCGTCGGTT GGGCTACGCG CTCGACGATG ACCAGCGATC TGGTTTTACA GGCGCTGTTG GCTGCGGTTT GGAAACGCAA ACCGGGACCC GGTGTCATGG TGCATTCCGA CCAGGGCAGT CAATTCACGA GCGATGACTG GCAGTCATTC CTGAAGGCAC ACCATATGGT GCCAAGCATG AGTCGGCGCG GTAATTGCCA CGACAATGCC GTGGCCGAGA GCTTCTTCAG TGCCCTAAAG AAGGAGCGAA TCAAGCGGCG CATCTATCCG GAGCCTATCC GAACCTTTGT GTGTGAGGCA TAA
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Protein sequence | MRAHLGEFRL YSMCRVLGVH RSGYYVWQRQ TVGARKREDE RLLGLIKHAW LASGGVYGYR KVTMDLRESG ETCSRHRVHR LMRGEGLRAE VGYGSKPRYR GGPVGVIANV LNREFAPTAP NRVWVTDITY IRTYEGWLYL AAVMDLYSRQ IVGWATRSTM TSDLVLQALL AAVWKRKPGP GVMVHSDQGS QFTSDDWQSF LKAHHMVPSM SRRGNCHDNA VAESFFSALK KERIKRRIYP EPIRTFVCEA
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