| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1754 |
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| Symbol | |
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| ID | 6123425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1958567 |
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| End bp | 1960135 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641638330 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001765044 |
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| Protein GI | 170733097 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAT CGATGACCCT GAAAACGAAA GCCGTGCGCG CGCTCACGGT GGCGAGCCTG
GCCGGCCCGC TCGCGGGCTG CGCGTGGTTC GCGCCGAGCG GCGAGCCGCC CGCGATGCCG
TCGCCCGCGC ACTACGGCGC CGCGCCGCAA GTCCAGCAGA CCGTGTCCGC GCACGGCGTC
GCGCAGCAGT TCGAGGTCGG CGCGCAGCCG GTGCCGGACT GGTGGAAACA GTACCGTTCC
GATGCGCTGA ACGCCCTCGT CGACGAAGGG CTGCGCAACA GTCCGACGCT GAGCGCGGCG
TCGCATTCGC TGGATGCCGC GCGCGAACAG TTGCGCGGTC AGATCGGCAG CTCGATGCTG
CCGTCGATCG ACGCGGGCGG CCAGGCCACG CGCCAGCGCG CGCTCGGCGT GCCGATTCCC
GCGCTCGGCG CGCCGACGCT GCTGTACGAC ACGTTCGTCG GGCAACTGCA GGCGAGCTAC
ACGGTCGACC TGTTCGGCGT GTCGCGCTTC GCGAACCGCG CGCTCGCGAA ACGCGTCGAC
GTCAGCGCGT TCCAGCTCGA ATCCGCGCGG CGCGCGCTGG CCGCGAACAT CGTCACCGCA
TCGATCACCG TGGCGGTGCT CAATGCGCAG ATCGACACGA CCGAGCGGCT CGTCTCGCTC
GCGAACGACC AGGCGCACGA CGCCGAGCGC CGCCATGCGC TCGGCTCGGC CTCGCGCAGC
GACGCGCTGA ATGCCCGGCA AAGCGCCGAT ACGTTCGCGG CGAGCCTGCC CGCGCTGCGC
CAGCAGCGCG ACTCGGCGCG CCACGCGCTC GCGGTGCTGG TCGGCCGCAC GCCCGACCGG
CCGCCGGCCG ATCTCGTGCT CACCGATCTG CACCTGCCCG AGCAGGTGCC CGTCGTCGTG
CCGTCGGACC TGCTGCAAAG CCGCCCCGAC ATCCAGGCCG CCGACGCGGG GCTGAAGGCC
GCCGCCGCCG AAGTGGGCCT CGCGACCGCG CAGATGTTTC CGCAACTGTC GCTGTCGGCG
GCGATGGGCA AAGGCGGCTT CAGCTGGCCG GCGATGCTGT CGGGCGCCGG CGCGATCTGG
AACGTCGGCG CGTCGCTGAG CCAGCCGATC TTCCATGGCG GCGCGCTGCT CGCCCAGCGC
CGCGCGGCGA AAGCGACCTA CGAGGCCGCG GTCGACCAGT ACAAGCAGGC CGTGCTCGGC
GCGTTCCAGA ACGTCGCCGA TTCGCTCGCG GCGCTCGAGC ACGACGCGGA GGCGCTCGAT
GCGTCGTCGC GCGCCGCGCT GTCCGCGCGG GGCGCATACG ACGACGCGGC CGCCCGCGTG
CGGCTCGGTG CGCTGCCGCC GTCGGCGGCG CGCGCGAGCG AGCTGCAGTA CCGCAATGCG
CGGCTCGACG AGATTCGCGC GACCGGCGCA CGGTTCGCGG ATACCGCGCG GCTTTACCAG
GCGATGGGCA CGCCGCCGGC CGACACCGGC GACAAGTCCG CTAAAACCGG CCACGCGGCC
GGCGACGGCA CGGCCGGCAC GCAAGCACGC GCCGCCACGC CCGCCGCCGC CGTCCCTTCG
GCGCAATAA
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| Protein sequence | MDRSMTLKTK AVRALTVASL AGPLAGCAWF APSGEPPAMP SPAHYGAAPQ VQQTVSAHGV
AQQFEVGAQP VPDWWKQYRS DALNALVDEG LRNSPTLSAA SHSLDAAREQ LRGQIGSSML
PSIDAGGQAT RQRALGVPIP ALGAPTLLYD TFVGQLQASY TVDLFGVSRF ANRALAKRVD
VSAFQLESAR RALAANIVTA SITVAVLNAQ IDTTERLVSL ANDQAHDAER RHALGSASRS
DALNARQSAD TFAASLPALR QQRDSARHAL AVLVGRTPDR PPADLVLTDL HLPEQVPVVV
PSDLLQSRPD IQAADAGLKA AAAEVGLATA QMFPQLSLSA AMGKGGFSWP AMLSGAGAIW
NVGASLSQPI FHGGALLAQR RAAKATYEAA VDQYKQAVLG AFQNVADSLA ALEHDAEALD
ASSRAALSAR GAYDDAAARV RLGALPPSAA RASELQYRNA RLDEIRATGA RFADTARLYQ
AMGTPPADTG DKSAKTGHAA GDGTAGTQAR AATPAAAVPS AQ
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