Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1748 |
Symbol | |
ID | 6123419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1949527 |
End bp | 1950420 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641638324 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001765038 |
Protein GI | 170733091 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.8769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGG ATCAACTGAT AACGTTCGCC GCCGTCGCCG AGCATCTGAA CATCAGCCGC GCCGCCGTGG CGCTGCATCT GTCGCAGCCG GCCGTGTCGG GCCAGTTGCG GCTGCTGCAG GACGAGTTCG GCGAGCCGCT GTACCAGCGC GACGGCCGCG GCATCCGCCT GACGCCGGTT GGCGAACAGC TCGCGCAGTA CGCTAAGGCA CAGCGCGACA CGTTCGCGCA GGCGCGTGCG TTTCGCGACG CGGTGCGCGG GCTGGAAGCC GGCACGCTGC GCATCGGCGC GAGCACGACG CCCGCGAGCT ACCTGCTGCC GTACCTGATC GCGGCGTTCC AGCCGCACGC GCCGCGCGTG TCGATCCAGA CGATGAGCGG CAATACGGCC GACGTGGTCG CGGCGCTGCC GTCGCTCGAC ATCGCGCTGA TCGAAGGGCC GCCTGGCGAG GCGCTGCCGC CGGGCACGGC CGTGCACGCG TGGCACGAGG ACGAGATCGT CGCGATCGTG CCGGCCGGCC ATCCGCTCGC AGCGCCCGGC TACGACGCGG GCGTGACACT CGACGCGCTG GCCGCGCATC CGCTCGTGCT GCGCGAGGCG GGCTCCGCGG TGCGGCAGCT CGTCGAACGC GCGTTCGCGC ATGGCGGCGC GCCGATGCGT GTCGCGTTCG AGATCGCGGG GGTCGAGGCG GTGAAGGAGG CCGTGCGCGC GGGGATGGGT GTCGGGTTCG TGTCCGCGAT GTCGCTGCGT CACGAGGATG CGGCGCTCGT GCCGCGCTCG CTGGCGCCCG CGCCGCTCAC GCGGCATTTC TCGATCCTCG TGCCGCATGG CGGCGCGCCG TCGTGGGTCG CCGCGCAATT CCTCGAAATG AGTCTCGCGC AGGACCTCGC ATAG
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Protein sequence | MTPDQLITFA AVAEHLNISR AAVALHLSQP AVSGQLRLLQ DEFGEPLYQR DGRGIRLTPV GEQLAQYAKA QRDTFAQARA FRDAVRGLEA GTLRIGASTT PASYLLPYLI AAFQPHAPRV SIQTMSGNTA DVVAALPSLD IALIEGPPGE ALPPGTAVHA WHEDEIVAIV PAGHPLAAPG YDAGVTLDAL AAHPLVLREA GSAVRQLVER AFAHGGAPMR VAFEIAGVEA VKEAVRAGMG VGFVSAMSLR HEDAALVPRS LAPAPLTRHF SILVPHGGAP SWVAAQFLEM SLAQDLA
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