| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1743 |
|---|
| Symbol | |
|---|
| ID | 6123414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1943836 |
|---|
| End bp | 1944882 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641638319 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001765033 |
|---|
| Protein GI | 170733086 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.79777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.50897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATA CGCAACCTTC CACGACGCGT CCGGCGACGA TCAGCGACGT CGCGCGCGAG
GCCGGCACGG GCAAGACCAG CGTTTCGCGC TACCTGAACG GCGAGACGCA CGTGCTGTCC
GTCGATCTGC GCCAGCGGAT CGAGGCGGCC ATCGCGCGCC TCAACTACCG GCCGAACCAG
ATGGCGCGCG GGCTCAAGCG CGGCCGCAAC CGGCTGCTCG GCATGCTCGC GGCCGACCTG
ACCAATCCTT ACACCGTCGA AGTGCTGCAG GGCGTCGAGG CCGCGTGCCA TGCGCTCGGC
TACATGCCGC TCATCTGTCA CGCGGCGAAC GAAGTCGAGA TGGAGCGCCG CTTCCTGCAG
CTGCTCACGA CCTACCGCGT CGAAGGGCTG ATCGTCAACG CGCTCGGCGC CGAGGAAGAC
GTGCTGCGCC CGCTGCGCGG CGCCGGCATT CCGGCGGTGC TCGTCGACCG CACGGTCGAG
GGCTTCGAGG CCGACCTGAT CGGCCTCGAC AACACCGACG CGATCGAGAC GGCGCTCGCG
CACCTGATCG AGCACGGTTT CGACGCGATC CACTTCGTCG TCCAGCCGTT CGAGCAGGTC
AGCTCGCGGC GCGTGCGCGA GGCCGCGTTC CGCGCGGCGC TGGCCGCACG CGGGCTACCG
GTGCCGCCGA CGGTCGTGCT CGACCTGATG AACGAACCCG ACGCGGCCGC GGCGGCGCTC
GCCGACGTCG ATGCCCGCAT CGACGACGCG GCCCGGCGCG GCGTGCGCGC GGCGCTGTTC
GCCGCGAACG CGCCGGTCGC GCTGGCGATC GCGCGCCACC TGCGCGCGCG CTTCGGCGCC
GCGTGGCAGC AAAAGGCGGC GCTGCTGTCG ATCGACGATC CGGAATGGGC CGAGCTGATC
GGCATCACGA CGATCCGTCA GCCGACCTAC GAAATCGGCT ACAAGGCCGT CGAATTCGTG
CATGAGCGGA TCGACGGCGC GGCGGGCGAC GTGCGCGTCG CGATGCTGCC CGGCGAGCTG
ATTGCGCGCG CGTCGACCGC AAGCTGA
|
|---|
| Protein sequence | MTDTQPSTTR PATISDVARE AGTGKTSVSR YLNGETHVLS VDLRQRIEAA IARLNYRPNQ
MARGLKRGRN RLLGMLAADL TNPYTVEVLQ GVEAACHALG YMPLICHAAN EVEMERRFLQ
LLTTYRVEGL IVNALGAEED VLRPLRGAGI PAVLVDRTVE GFEADLIGLD NTDAIETALA
HLIEHGFDAI HFVVQPFEQV SSRRVREAAF RAALAARGLP VPPTVVLDLM NEPDAAAAAL
ADVDARIDDA ARRGVRAALF AANAPVALAI ARHLRARFGA AWQQKAALLS IDDPEWAELI
GITTIRQPTY EIGYKAVEFV HERIDGAAGD VRVAMLPGEL IARASTAS
|
|---|
| |