Gene Bcenmc03_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1730 
Symbol 
ID6123401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1932820 
End bp1933242 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID641638306 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001765020 
Protein GI170733073 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.245052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.398781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA ACGTCGGGCA GGACGAAAGC GACGAGGTGA TCGCGAACAT CAACACGACG 
CCGCTCGTCG ACGTGATGCT GGTGTTGCTG ATCATCTTCC TGATCACGAT TCCGGTCGTC
ACGCACACGA TCCAGCTGCA GTTGCCGAAG GAGGTCGTGC AGCCGCTGCA GACCACGCCG
AAGAGCGTCG AGATCGCGGT GAACCGCGAT GGCGATTTCT TCTGGGGCGA GCAATTGGTG
GACGCAGCGA CGTTGCTCGC GAAGCTGAAG GGCGTGTCGC AACAGCAGCC GCAACCGAGC
GTGCACGTGC GGGGCGACCA GAACACGCGC TACGAGTTCA TCGGCCGGGT CATCACGATG
TGCGAGCGGG CGGGTATCGC GAAGGTGTCG TTCATCACGG AACCGCCGGC GCGGGGTGGT
TAG
 
Protein sequence
MGMNVGQDES DEVIANINTT PLVDVMLVLL IIFLITIPVV THTIQLQLPK EVVQPLQTTP 
KSVEIAVNRD GDFFWGEQLV DAATLLAKLK GVSQQQPQPS VHVRGDQNTR YEFIGRVITM
CERAGIAKVS FITEPPARGG