Gene Bcenmc03_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1729 
Symbol 
ID6123400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1932240 
End bp1932671 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID641638305 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001765019 
Protein GI170733072 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.344819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.411773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATGA ACGTGCCTTC GGGCGGGAGC AGCAGCGAGC CGGACGTGAT GGTCGACATC 
AACACCACGC CGCTGATCGA CGTGATGCTG GTGCTGCTGA TCATGCTGAT CATCACGATC
CCGATCCAGA TGCATTCGGT GAAGATGGAC CTGCCGGTGG GGAACCCGCC GCCGCCCGCC
GCACCGCCGG AAGTCGTGCA GATCGACATC GACTTCGACG GCACGACGAC GTGGAATGGC
GCGCCGGTGC CGAATCGCGC GGCACTCGAG GCGAAGCTGA CGGAAGTCGC GCACGAGCCC
GTACAGGCAG AGATCCATCT GCGGCCGAAC AAGCTGGCGC CATACAAGGA CGTGGCGGCC
GTCCTGGCGT CCGCGCAGCG CGTGGGCGCG ACGAAGATCG GCCTGATCGG CAACGAGCAG
TTCATGCAAT GA
 
Protein sequence
MGMNVPSGGS SSEPDVMVDI NTTPLIDVML VLLIMLIITI PIQMHSVKMD LPVGNPPPPA 
APPEVVQIDI DFDGTTTWNG APVPNRAALE AKLTEVAHEP VQAEIHLRPN KLAPYKDVAA
VLASAQRVGA TKIGLIGNEQ FMQ