Gene Bcenmc03_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1727 
Symbol 
ID6123398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1930155 
End bp1930730 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID641638303 
ProductXRE family transcriptional regulator 
Protein accessionYP_001765017 
Protein GI170733070 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.170715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.149129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGC CCCCTGATGA GTCGGTTCTG GTCGCCGTAT CGCTAGGCAA CAAGATCCGG 
GCGCTGCGCC AGCGCCTGAA GCTCACGCTT GACGAGACGG CCGGGATCGC GGGCATTTCG
AAGCCGTTCC TGTCTCAGGT AGAGCGTGGG CGCGCGACGC CGTCGATCAC GTCACTGGTC
CGGATCGCGC AAGCGCTGGG CGTGACGATG CAGTACTTCA TCGACACGCC GACGGAAGCG
CGTTCGGTGT GCCGCGGGAA CGCGATGCAG TATTTCCAGT TCGCGAATTC GGCCAGCCTG
TTCGCCAGGC TGACGAACCT GGTGGATGGT CGCAAGCTCG ACGCGATTCT CGTCAGGATG
CCGGCGGGGC AGTCGCCGTC CGAGATAACG ACACACGCGG GCGAGGAGTT CGTCTATGTG
ATGCGCGGGC AGGTCGCACT GACGCTCGAG GATTGCACGT TCACGCTGAA CGAGGGCGAT
ACCGCGCACT ACGAATCGAC GACGCCGCAT GCATGGCACA ACACGGCCGA CGAAGAGGCG
GTGATCGTCT GGGTCGGTAC GCCGCGGCTG TTCTAG
 
Protein sequence
MTVPPDESVL VAVSLGNKIR ALRQRLKLTL DETAGIAGIS KPFLSQVERG RATPSITSLV 
RIAQALGVTM QYFIDTPTEA RSVCRGNAMQ YFQFANSASL FARLTNLVDG RKLDAILVRM
PAGQSPSEIT THAGEEFVYV MRGQVALTLE DCTFTLNEGD TAHYESTTPH AWHNTADEEA
VIVWVGTPRL F