| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1725 |
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| Symbol | |
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| ID | 6123396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1924864 |
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| End bp | 1926738 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641638301 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001765015 |
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| Protein GI | 170733068 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0449384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.081167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT TGAAATGGCG ATGGGCAGGC GTGCCGCGCG CGGCGCTGTT CGCGTGCGCC
GTGCTGCTCG TGTCGGGTAG CGCCATGCCA CGTGCGGCGC TCGCGGTGCC GGCGATCGCG
CAATACGACC AGCCCAAGTA CCTGGCCAAT TTTACGCATT TCGATTATGC CGATCCCGAC
GCACCGAATG ACGGCACGCT CAACTTCGAA AACTACGACG AAGCACAGAG CTACGACTCG
TTGAACCCGT TTCTGACCCG CGGCTCGCCC GCGCCGGACA TCAAGAACCT GATGTTCGAC
ACGCTGATGC AGCGCAGCTG GGATGAACTC GCGTCCGAAT ACGCGCTGAT CGCCGACGAC
GTCGAGGTCG CGCCGGATCG ACTGTCCGCA ACGTTCCACA TCAATCCGGC CGCGCGCTTC
TCGAACGGCG ACGCAATCAC CGCGGCTGAC GTCAAGTATT CGTTCGATAC GCTGACGAGC
CCGCAGGCGT CGCCGCTGTA CAACGCGCAA TTCTCGATCA TCAAGCGCGC GGTGGTCGTC
GACAGCCACA CGATCCGCTT CGAGTTCAAG CACGCGGAGC GCGACGCCGC GCTGATCGCA
GGCGACCTGC CGGTGTTCTC GCCGAAGTGG GGGCAGCGCG CGGACGGTAC GCGGCCGGCG
TTCGACCAGA TCGCGAACGA GCCGCCGATC GCGAGCGGCG CGTACCTGAT CGAGCAGCGC
AGGAACGACA AGCAGATCGC GTACGTGCGC AACCCGCACT ACTGGGCCGC GAATCTGCCG
TCGCGGCGCG GGATGTTCCG TTTCGCGCGC GTGTCGTTCA AGCTGTACCT CGACCAGTAC
ACGGCGCTCG AGGCGTTCAA GGCCGGCGAT GTCGACGCGC GGATGGAGTA CAGCTCGACG
CAGTGGGCGC GCAAGTACGT CGGCAAGAAT TTCAGCAACG GCATGCTGAA GAAGGGGGAG
TTCCCGGACG GCCCCGCGCA GATGCAGGGC TTCCTGATGA ACCTGCGCAA ACCGATGTTC
CAGGACGTGC GCGTGCGGCA TGCGCTCGCG CTGGCGTTCG ACTTCGACTG GATGAGCCGG
ATGATGTTCT ACGGACAGTA CCGCCGCACC AACAGCTTCT GGGACGCGAG CCCGTTCGCC
GCGTCCGGCA TGCCGAGCGC GAAGGAGCTC GCGCTGCTCG AACCGTACCG GTCGACGCTG
CCGCCGGAGG TGTTCGGGCC GATGGTCAAG CAGCCGTCGA CGCTGCCGCC GGGCTCGCTG
CGCGCGAACC TCAGGCAAGC GCGCGACTTG CTCGCGCAGG CCGGCTGGCA CTATCGCGAC
GGCGCGCTGC GCGACGCGAA CGGCACGCCG ATGACGATCG AGATCATCGA CGACCAGCCC
GGCATGGATC GCCTGATCCT GCCGTACACG CAAGCGCTCG CGACGCTCGG CATCCATGCG
TACCTGCACG AGATCGACAG CGCGCTCTAC CAGAAGCGGC TCGACAATTT CGAATACGAC
ATGACGACGT ATATCTACTC GCCCGTGACG ATCCCCGGCG CGGAGCTGAC GCGCCGTTTC
GGCAGCGCGG CTGCCTCGCA GCCCGGCTCG GAGAACTATC CGGGCGTGAA GTCGAAAGCC
GTCGATGCGC TGATCCGCGC GGCGCTCGCG GCGAATACGC TCGACGATCT CGAGACGGCC
ACGCACGCCC TTGATCGCGT GCTGATCAAC CTGTACGTAC TGGTCCCGCA GTACTACATG
CCGAACGCGC GGATCGCGTA CAAGACGACG CTCGGCCATC CGGCCGTCGT GCCGGCTTCC
TATCAGTACG AGGACTGGAT CGTCGACTAC TGGTACGGGA AGCGGCCGGC GGTCCAACCC
GCTCCGGCGG CCTGA
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| Protein sequence | MKLLKWRWAG VPRAALFACA VLLVSGSAMP RAALAVPAIA QYDQPKYLAN FTHFDYADPD
APNDGTLNFE NYDEAQSYDS LNPFLTRGSP APDIKNLMFD TLMQRSWDEL ASEYALIADD
VEVAPDRLSA TFHINPAARF SNGDAITAAD VKYSFDTLTS PQASPLYNAQ FSIIKRAVVV
DSHTIRFEFK HAERDAALIA GDLPVFSPKW GQRADGTRPA FDQIANEPPI ASGAYLIEQR
RNDKQIAYVR NPHYWAANLP SRRGMFRFAR VSFKLYLDQY TALEAFKAGD VDARMEYSST
QWARKYVGKN FSNGMLKKGE FPDGPAQMQG FLMNLRKPMF QDVRVRHALA LAFDFDWMSR
MMFYGQYRRT NSFWDASPFA ASGMPSAKEL ALLEPYRSTL PPEVFGPMVK QPSTLPPGSL
RANLRQARDL LAQAGWHYRD GALRDANGTP MTIEIIDDQP GMDRLILPYT QALATLGIHA
YLHEIDSALY QKRLDNFEYD MTTYIYSPVT IPGAELTRRF GSAAASQPGS ENYPGVKSKA
VDALIRAALA ANTLDDLETA THALDRVLIN LYVLVPQYYM PNARIAYKTT LGHPAVVPAS
YQYEDWIVDY WYGKRPAVQP APAA
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