| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1721 |
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| Symbol | |
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| ID | 6123392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1917828 |
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| End bp | 1921007 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638297 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001765011 |
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| Protein GI | 170733064 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.733939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGC CATCGTTCTT CATCGATCGT CCCGTATTTG CGTGGATCGT TGCGCTCGCA
ATCGTCGTCG CGGGCGTGCT CGCCATTCCG CAGCTTCCGA TCGCGCAGTA TCCGCGGCTT
GCGCCGCCGC GGGTCGTGAT CACGGCCGCG TATCCGGGCG CGTCGACCGA GACGGTCGAC
GGCGACGTCG GCAGCATCAT CGAGGAAAGC CTCGACGGCG CCGACGGGCT TCTGTATTAC
GCGACGAGCA GCGACGGTCA CGGCAATCTC GAGATCGACG TCACGTTTTC GCCCGGCACC
GATCCGGACA TCGCGCTCGT CGACGTGAAC AACCGGCTGA AGCAGGTCGA GCCGCGGTTG
CCGCAGCAGG TCGTCCAGCA GGGGATCGGC GTATTCAAGG CAGCGAACAC GTTCCTGATG
CTCGTCACGC TGACGTCGAC CGACGGCACG CGCGATTCCG CGCAACTCGG CGATTACCTG
AACCGCTACG TGCTGCGCGA ACTGAAGCGT GCGCCGGGCG TCGGCGCGGC CGAGCTGTGG
GACGCCGGCG AGGCGCTGCG GGTCTGGCTC GATCCGAACA AATTGCGTGA ATACGACCTC
GGCGCCGACG ACGTGATCGC GGCGATCGGC GTGCAGAACG CGACGGTGAC GGCCGGTGCG
ATCGGCGATG CGCCGTTCGA GCGCGGCCAG CAGCTTACCG CGACGATCGT CGTCAAGGGA
CAGCTGACGT CGCCGGAGGA GTTCGGCCGG ATCGTGCTGA AGTCGAAGCA GGACGGTTCG
GTGGTGCGCG TCGCCGACGT CGCGCGTGTC GAAATCGGCC GCGACGACTA TTCGTTCTAT
TCGCGGCTGA ACGGCCGCCC GGCGGCCACC GTCGGCATTC AGCTCGGCCC GCGCGGCAAC
GCGCTCGAAA CGTCGAACGC GATCCGTGCG CGGCTTGCCG AACTGTCGAG GGTATTGCCG
CCGGGCGTGG CGATGGAGAT TCCGTTCGAT GGCGCCCATT TCGTGACGAT CGCGATCCGG
GAGGTCGTGC TGACGCTCGT CGAGGCGGTC GTGCTGGTGT TTTGCGTGAT GTGGCTGTTC
CTGCGCGATC TGCGTTACAC GCTGGTGCCG ACCGTCGTGA TTCCCGTCAC GCTGATGGGT
GCGTTCGTCG CGATGTGGGC GTTCGGACTG TCGATCAACG TGTTCACGAT GTTCGGTCTC
GTGCTGGCGA TCGGCATCCT TGTCGACGAT GCGATCGTCG TCGTCGAGAG CGTGCACCGG
GTGATGGAGG AGGGCGTGTC GCCGCGCGAC GCCACGCGCC GCGCAATGAA GCGGATCGGC
GGTGCGATCG TCGGGGTGAC CGCGGTGCTG ACCGCCGTAT TCGTGCCGAT GGCGTTCTTT
CCGGGCGCCG TCGGCGGCAT CTACCGGCAG TTCGCGGTGG CGATGATCGC ATCGATGCTG
GTGTCGTCGT TCATGGCGCT GTCGCTTACG CCCGCGCTGT GCGCGAACCT GCTGAAGCCG
GTCGCGCGAC ACGACGGCGG AATCGGCCAC GCGCGGCGAC GTGGCATCGG CACGCGTCTG
GCCGACTGCT TCGGTGCGTC CTTCGCGCGC GTCGAATCCG GTTATCGCCG TCTCGCCGTG
TTCGCCGTGC GCCGCACCGG CATGGTCGTG GCGGTCTACG CGGCGCTCGT GATCGCATGC
GGGCTGCTGT ACTGGATGAT GCCGGGCGGC TTCCTGCCGA CCGAGGACCA GGGGCAACTG
CAGGTGATGA TCCAGTTGCC GGCGGGCGCC ACGCAGGCGC GCACGCTCGC GGTCGTCGAG
CGTGTCGAGG CGATCCTGCG CGCGGAGCCG GCGATCGCGA ACGTGACGAG CGTGATTGGC
TGGAGTTTCG CGGGCAGCGG GCAGAACGTC GGGATGGCGT TCGTGGAGCT GAAGGACTGG
TCGCGGCGCG ACGTCGACGC GATGGCGTTG CGCGACCGGC TCAACGGGCG TTTCGGCACG
ATCCTCGACG GCGACGTCGA GGCGTCGCTG CCGCCGTCGG TGCGCGGCAT CGGGCATTCC
GACGGATTCA CGTTCCGGCT CGAGGATCGG GGCGGCGTCG GGCTCGACGC GTTGAAGGCG
GCTCGCGAGC AGTTGTCCGG GCGAGCGAAA ACGGATCCGT TGCTCGCCGC CGTGCATTTC
GAAGACCTGC CGGACGCGCC GCGCATCGAA CTCGATGTCG ATCGTGCGAA GGCGTATGCG
CTCGGCGTGC CGTTCGAGCG AATCGCGGGC CTTCTGGGCG GCACGTTCGG CTCGAACTAC
ATCAACGATT TTCCGGCATC GGGCCGGATG CGGCGGGTGA TCATCGAGGC CGACCCGGCC
GCGCGCGCGA CCGATGCGCA ACTGATGGCG CTGACGGTGC CGAACCGCAC CGGCGACATG
GTTCCGTTGT CGGCCATCGC AGCGCCGCAC TGGACGGTCG GCCCGGTGAT GCTGAATCGC
TACAACGGCT ATCCGTCGCT CGACATCAGC GGCCGCGCGG CGACCGGCAC GAGTTCGGGC
GCGGCGATGG CGGAGATGGA GCGGCTCGCC GGCGCACTGC CGGTCGGGGT CGGCTTCGAC
TGGGTCGATG CGGCGCGCGA GGAGCAGGTT GCCGCGCGGC AAACGCCGCT GCTCGTCGGG
CTGTCCGTGC TCGCGGTTTT CATGGCGCTT GCCGCGCTGT ACGAAAGCTG GACGGTCCCG
CTGTCCGTGC TGACGATCGT GCCGCTCGGC ATGATCGGCG CGATCGCGGC GGCGCTCGCG
CGCGGGATGC CGAACGACGT GTATTTCAAG GTCGGGATGA TCACGGTGGT CGGGCTGGCG
GCGAAGAATG CGATCCTGAT CGTGCAGTAC GCGCGCGATC TGGCCGGGAG CGGCGTGCCG
CTGCGGCAGG CGGTGATCGA CGCGGCCGCC GCGCGATTCC GGCCGATCAT GATGACGTCG
ATGGCGTTCC TGCTGGGCGT CGTGCCGCTC GTGCTGGCGA CGGGCGCGGG TGCGGAAAGC
CGGCGATCGA TCGGCACGGG TGCGTTCGGG GGCGTGCTCG CCGCGACGAT GTTCGGGCTC
GTGTTCGCGC CGGTGGCGTT TCGGGTGGTG GTATCCATAG GCCGGCGCGG GCGGCATGCG
GCGGTGACGA AGCGCGACGC GCAGCGCGTG GAAACGGCTG AAAATCTGGA GATCGATTGA
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| Protein sequence | MPMPSFFIDR PVFAWIVALA IVVAGVLAIP QLPIAQYPRL APPRVVITAA YPGASTETVD
GDVGSIIEES LDGADGLLYY ATSSDGHGNL EIDVTFSPGT DPDIALVDVN NRLKQVEPRL
PQQVVQQGIG VFKAANTFLM LVTLTSTDGT RDSAQLGDYL NRYVLRELKR APGVGAAELW
DAGEALRVWL DPNKLREYDL GADDVIAAIG VQNATVTAGA IGDAPFERGQ QLTATIVVKG
QLTSPEEFGR IVLKSKQDGS VVRVADVARV EIGRDDYSFY SRLNGRPAAT VGIQLGPRGN
ALETSNAIRA RLAELSRVLP PGVAMEIPFD GAHFVTIAIR EVVLTLVEAV VLVFCVMWLF
LRDLRYTLVP TVVIPVTLMG AFVAMWAFGL SINVFTMFGL VLAIGILVDD AIVVVESVHR
VMEEGVSPRD ATRRAMKRIG GAIVGVTAVL TAVFVPMAFF PGAVGGIYRQ FAVAMIASML
VSSFMALSLT PALCANLLKP VARHDGGIGH ARRRGIGTRL ADCFGASFAR VESGYRRLAV
FAVRRTGMVV AVYAALVIAC GLLYWMMPGG FLPTEDQGQL QVMIQLPAGA TQARTLAVVE
RVEAILRAEP AIANVTSVIG WSFAGSGQNV GMAFVELKDW SRRDVDAMAL RDRLNGRFGT
ILDGDVEASL PPSVRGIGHS DGFTFRLEDR GGVGLDALKA AREQLSGRAK TDPLLAAVHF
EDLPDAPRIE LDVDRAKAYA LGVPFERIAG LLGGTFGSNY INDFPASGRM RRVIIEADPA
ARATDAQLMA LTVPNRTGDM VPLSAIAAPH WTVGPVMLNR YNGYPSLDIS GRAATGTSSG
AAMAEMERLA GALPVGVGFD WVDAAREEQV AARQTPLLVG LSVLAVFMAL AALYESWTVP
LSVLTIVPLG MIGAIAAALA RGMPNDVYFK VGMITVVGLA AKNAILIVQY ARDLAGSGVP
LRQAVIDAAA ARFRPIMMTS MAFLLGVVPL VLATGAGAES RRSIGTGAFG GVLAATMFGL
VFAPVAFRVV VSIGRRGRHA AVTKRDAQRV ETAENLEID
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