Gene Bcenmc03_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1662 
Symbol 
ID6123338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1853857 
End bp1854822 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID641638243 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001764957 
Protein GI170733010 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.902984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCG TTTCCGCTCC CGCGAAGATC GTGTTCCTCG ACCGCGCGAC GCTGTCGCTG 
CAGATCGGGC TGAAGCCGTT TCCGTTCCCG CACGTAGTGC AGACATTCGA CCGGACGGCC
GCGCACGAGG TCGCGGCGCG CATCCGCGAC GCGGACATCG TCGTGACCAA CAAGGTGCGG
CTCGACGCGG CGGCCCTCGC CGCCGCGCGG CCGTTGCGGA TGATCGCGAT CGCCGCGACC
GGCACGGACA TCGTCGATCT CGATACCTGT GCGGCACGCG GGATCGTCGT GAGCAATATT
CGCGGCTATG CGGTGCGCAC GGTGCCCGAG CATACGTTCG CGCTGATCTT CGCGCTGCGG
CGCAGCCTCG TTGCTTATCG CGACGCGGTG CGCGCGGGGC GCTGGCTCGA CAGCGGACAG
TTCTGCTTCT TCGATCATCC GATTCGCGAC CTGGCCGGTT CGACGCTCGG GATCGTCGGC
GACGGCGTGC TCGGGCGCGC GGTGGCCGCC ATCGCACGTG CGCTCGACAT GCGGGTGCTG
TTCGCGGCGC ACGGCGACAC ATCGGGCGAC GGTCATGCGC CGCTCGACAC GCTGCTGCGC
GACAGCGACG TGATTACGCT GCACTGCCCG CTCACGCCGG CCACGCGGCA CCTGATCGAC
GCACACGCGT TTGCGCGGAT GGCGCGCCGG CCGCTGCTGA TCAATACCGC GCGCGGCGGG
CTCGTGGACG AAAGCGCGCT CGTCGATGCG TTGCAGTCGG GGCAGATCGC GGGCGCCGGG
TTCGACGTGG TCACGCAGGA GCCGCTGCCG GCCGCGCATC CGTTTCACGC GATCCTGTCG
CATCCGGCGT TCATCCTGAC GCCGCACGTT GCGTGGGCGA GCGACGAGGC GATGCAGGCG
CTGGCCGATC AGCTCGTGGA CAACATCGCC GCGTTCGTCG GTGGTGAACC GCGGCACGTC
GTGTGA
 
Protein sequence
MFSVSAPAKI VFLDRATLSL QIGLKPFPFP HVVQTFDRTA AHEVAARIRD ADIVVTNKVR 
LDAAALAAAR PLRMIAIAAT GTDIVDLDTC AARGIVVSNI RGYAVRTVPE HTFALIFALR
RSLVAYRDAV RAGRWLDSGQ FCFFDHPIRD LAGSTLGIVG DGVLGRAVAA IARALDMRVL
FAAHGDTSGD GHAPLDTLLR DSDVITLHCP LTPATRHLID AHAFARMARR PLLINTARGG
LVDESALVDA LQSGQIAGAG FDVVTQEPLP AAHPFHAILS HPAFILTPHV AWASDEAMQA
LADQLVDNIA AFVGGEPRHV V