| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1635 |
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| Symbol | |
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| ID | 6123311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1825283 |
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| End bp | 1826791 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638216 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001764930 |
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| Protein GI | 170732983 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.628977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0608615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC ACCGCGACAC TCTTCCGATA GACGATGCGG CCGTCACGCC GGTCAGGGAA
CACTATGTAC AGGGCCGATT CGACGCCGCG ATCCAGGCGG CGGAATCGCT CGTCACGCAG
CACGGCGATC ACGGTGAATT GCTGAACCTC GCGGGCGTGT GCCATTTGAA GCTCGGTAAC
CTCGCCGCCG CCGAGGCGTG CCTCGAGCGG GCAGCGTACG CGGCGCCCCG GTCGGCCGAT
ATCGACAACA ACCTGGGCGT ACTCTATCAG TCGAGCGGGC GGGATGCCGA CGCCGAGCGG
GCGTTCGTGC GCGCCGTTTC GAAAGCACCG GGCCACGGTC AGGCGCACCT CAATCTCGGC
ATGCTGTTGC GGTCCAGGCA TCGTCTGGAA GAGGCGGAAC GGGCGATCCG GATCGCCGTC
GAGCAGGCGC CGGGCGATCA CGCAGCGCTG AATGCGCTCG GCCTGGTGTT GAAGGACCTG
GGCCGCTACG ACGAAGCCGA GGCGGCCTAT CGGCAGGCGC TGGCGCTCGA ACCCGGGCGT
GCCGAATACC GGCTCAATCT GGCGAATGTG CTGCTGCACC GGAACGACTG GATCGCGGGG
TTGCCGCTCT TCGAAGCGCG TCATGCCCCC GATCTCAACG GCGCCTTCTC CGACGCGCCT
GCCGTATCGT TCCCGCAGTG GCAGGGCGAG CCGATCGACG GCGCGTCGCT GCTGATCTGG
CCGGAACAGG GGCACGGCGA CCAGATCCAG CTGGTCCGCT ATGTCAAAAA ACTCCGCATG
CTCGGGGCGA AACGGATCAC GCTGGTGTGC TCGGCCGCGA CGCAGCGGCT GTTCGCGACC
CTCCCCGAAG CGGATGCCGT CGTGGCGCGC GACAGGTTCG ATCCGGCCGC CTGCCCGCGT
CACGATTTCT GGACCTGCGT GTGGAGTATT CCCGTCAATC TGCGGGAATC GCCGGCGTCC
ATTCCGGCCA CGCTGCCTTA TCTGCGCGCG CCTCGGCATG CGGCGTCGAA ATGGGACCGG
CTGATGCCCA AAGGGCGCCT GCGCGTCGGC CTGGTGTGGC AAGGCAATCC CGGTCACGCG
AACGACCGCG TGCGCTCGCT GCCCGGCCTG CAGACGCTCG CGCCGCTGTG GGACATCGAC
GGCGTCACGT TCGTCAGTCT GCAGAAGAGC GCGAATGAGG CCGATCTGCG CGCCGGAATC
GGCGATCGCT TCATCGTCAA TCTGGGCAAC CGGACCACCG ATTTCGCCGA TGTCGCCGCG
ATCGTCGCGC GGCTCGATCT CGTCATCGGC GTCGATACCG CCGTGATGCA CCTGAGCGCG
GCGCTCGGCA AGCCCGCGTG GATTCTGCTG TCGAACGTGG GCACGGACTG GCGCTGGAGC
GGTGCGGGCA CGACTTCCGT GTGGTACCCG GGCGTCGTCA CGCTGTTTCG GCAGGCGGCG
ACGGAAACGG ACTGGTCCGG CGTGGTCGCA CGCGTTTCGC AGGCGTTGTC CGCGATGCGT
GCGACATAG
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| Protein sequence | MQPHRDTLPI DDAAVTPVRE HYVQGRFDAA IQAAESLVTQ HGDHGELLNL AGVCHLKLGN
LAAAEACLER AAYAAPRSAD IDNNLGVLYQ SSGRDADAER AFVRAVSKAP GHGQAHLNLG
MLLRSRHRLE EAERAIRIAV EQAPGDHAAL NALGLVLKDL GRYDEAEAAY RQALALEPGR
AEYRLNLANV LLHRNDWIAG LPLFEARHAP DLNGAFSDAP AVSFPQWQGE PIDGASLLIW
PEQGHGDQIQ LVRYVKKLRM LGAKRITLVC SAATQRLFAT LPEADAVVAR DRFDPAACPR
HDFWTCVWSI PVNLRESPAS IPATLPYLRA PRHAASKWDR LMPKGRLRVG LVWQGNPGHA
NDRVRSLPGL QTLAPLWDID GVTFVSLQKS ANEADLRAGI GDRFIVNLGN RTTDFADVAA
IVARLDLVIG VDTAVMHLSA ALGKPAWILL SNVGTDWRWS GAGTTSVWYP GVVTLFRQAA
TETDWSGVVA RVSQALSAMR AT
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