| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1619 |
|---|
| Symbol | |
|---|
| ID | 6123295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1803814 |
|---|
| End bp | 1806078 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641638200 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001764914 |
|---|
| Protein GI | 170732967 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00285071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TGGAGCAGAA GAAGATGGAG TGGGCAACAG GCACGCGTTT GCGTGCGATC
GCAGCCGCGG CAAGCGTGGC GTTCGGTACG GCGGCGGCAG GGCACGCCTA TGCCCAGACG
GCGCCGGCCG TGAACGCGGG CGCCACGGCG TCGGCGAGCA GTGCGCAAAC CGGCGCGACG
GCGACGACGT CGACCAGCGC GCAAAACGGC ACGCTGCCGG CGATCACCGT CAACGCGGCC
TCGGCCGGAG ACGGCACGGT CGGGCTCGTC GCGAAACGCA GCACGACCGG CACCAAGACC
GACACGCCGC TCAACGAGAT CCCGCAGACG ATCAACGTCG TCACCGCGCA GCAGATCGAG
ATGACCGGCG CCACCGACGT GAACGCGGCG CTGCGCTACG TGCCGGGCTT CTCGTCGTAC
GGGTCGGACA ACCGCTCCGA CTGGTACGCG GCGCTGCGCG GCTTCACGCC GACCGCCTAC
GTGAACGGGC TGCAGGTGCC GAACACGATC AACCTCGCGA GCTGGCGCGT CGATCCGTAC
ATGATCGACA GCATCAGCGT GCTGCGCGGG CCGACCTCGG TGCTGTACGG CGCGGGCGAT
CCGGGCGCGA TCATCGACGT GCACACCAAG CTCGCCGACG GCGAGCGCGT GCGCGAAGCA
GGCGTGCAGA TCGGCAACTA CGCGCGCAAG CAGTTCATGA TCGACGTCGG CGACAAGCTC
GACCCGGACG GCAAGTATGC GTACCGGTTC GTCGGCGTCG CGCGCGACGG CAACGCGCTG
ACGGGCCCGA ACAACGACCA GCGCGTCGCG CTCGCGCCGT CGTTCCGCTG GCGCCCGGAC
GCGGATACGT CGCTGACGCT GTCCGCGACC TACCTGCAGG ACTGGGGCGA CATCTCGTCG
AACTTCCTGC CCGCGCAAGG CACGGTGCTG CCGAACCCGA ACGGCCAGAT CAACAAGGAC
GTCTACGAAG GCGACGGCAA CTTCAACTAC TACCGCAAGA AGCAGTGGTC GGTCGGTTAC
CAGTTCGAGC GCAACCTGAC GCCGGCCTGG ACGTTCCGCC AGAACACGCG GCTGATGCAC
CTGTCGCTCG ACAACGGCTC GGTGTTCGGC AACGGTTTCG TCGAGGGCAG CACGACCGAC
GTGTCGCGCT GGGCCGGCGT GTTCCAGATG AACTACAGCC GCTTCGACAT CGACAACAAC
CTCGAGGGCC GCTTCGCGAC GGGCCCGCTG CAGCACACGC TGCTGCTCGG CTTCCAGTAC
AACCGCCAGA CCGCGACCGA CAGCGAATGG CTCGCCGCCG CGCCCCCGCT GAACATCTAC
AACCCGGTCT ATCAGCCCGT CACGACGGCG GTGTTCACGC CCGACGCGAC GATCCGCACC
AACACGTACA CGACGATGAA CACGTTCGGC CTGTACGCGC AGGATCAGAT CAAGTGGAAC
CGCTGGACGC TGACGCTCGG CGGCCGCGAG GACTGGGTCA ACATGCGGAT GGACGACCGC
GCGGCCGGTA CGTCGACGAA GGCGGACGTC ACGGCGTTCA CGGGCCGCGT CGGCCTCACG
TACCAGGGCG ACTACGGGCT GTCGCCGTAC GTCAGCTACG CGACGTCGTT CAACCCGTTG
ATCGGCGTGA ACCTGGTCGG CGGCGGGCTG CCGCAGCCGA CGCGCGGCAA GCAGATCGAA
GCCGGCCTGC GCTGGCAGCC GCCCGGCAAG AACCTGATGC TGAACGCGGC GATCTACCAG
ATCAACCAGA CCAACGTGCT CACGTCGGCG CTGCCGAGCC AGGACACGAC CGGCACGAAG
TCGGTGCAGA CGGGCGAAGT GCGCTCGCGC GGGATCGAGC TGAGCGCGAC CGGCAAGGTC
ACGCGCAACC TGTCGGTGAT CGCGTCGTAC GTCTATCAGG ACGTGAAGAA CGTGCAGGCC
AACGACGTCT CGCTGAACAA CTGGCCGGTC GACATTCCGC GCCCGCGCCA GATGGCGTCG
CTGTGGACCG ACTGGACGTG GTACACGGGG CCGCTCGCCG GCTTCGGCCT CGGCGGCGGC
ATTCGCTACC AGAGCGCGTC GGCCGGTGCG GCCGACAATT CGCTGACGGT ATCGAGCGTC
ACGCTGTTCG ACGCGGGCCT GCATTACGAC GTGCGTAACT GGCGCTTCGC CGTGAACGGG
ACGAACCTGT TCAACCGCCA TTACATCAGC GGTTGCCAGT CGAACAACGT CTGCATTTTC
GGGACCGACC GCACCGTGAT CGCGACCGCG AAATACAACT GGTGA
|
|---|
| Protein sequence | MKKVEQKKME WATGTRLRAI AAAASVAFGT AAAGHAYAQT APAVNAGATA SASSAQTGAT
ATTSTSAQNG TLPAITVNAA SAGDGTVGLV AKRSTTGTKT DTPLNEIPQT INVVTAQQIE
MTGATDVNAA LRYVPGFSSY GSDNRSDWYA ALRGFTPTAY VNGLQVPNTI NLASWRVDPY
MIDSISVLRG PTSVLYGAGD PGAIIDVHTK LADGERVREA GVQIGNYARK QFMIDVGDKL
DPDGKYAYRF VGVARDGNAL TGPNNDQRVA LAPSFRWRPD ADTSLTLSAT YLQDWGDISS
NFLPAQGTVL PNPNGQINKD VYEGDGNFNY YRKKQWSVGY QFERNLTPAW TFRQNTRLMH
LSLDNGSVFG NGFVEGSTTD VSRWAGVFQM NYSRFDIDNN LEGRFATGPL QHTLLLGFQY
NRQTATDSEW LAAAPPLNIY NPVYQPVTTA VFTPDATIRT NTYTTMNTFG LYAQDQIKWN
RWTLTLGGRE DWVNMRMDDR AAGTSTKADV TAFTGRVGLT YQGDYGLSPY VSYATSFNPL
IGVNLVGGGL PQPTRGKQIE AGLRWQPPGK NLMLNAAIYQ INQTNVLTSA LPSQDTTGTK
SVQTGEVRSR GIELSATGKV TRNLSVIASY VYQDVKNVQA NDVSLNNWPV DIPRPRQMAS
LWTDWTWYTG PLAGFGLGGG IRYQSASAGA ADNSLTVSSV TLFDAGLHYD VRNWRFAVNG
TNLFNRHYIS GCQSNNVCIF GTDRTVIATA KYNW
|
|---|
| |