| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1610 |
|---|
| Symbol | |
|---|
| ID | 6123286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1779743 |
|---|
| End bp | 1780591 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641638191 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001764905 |
|---|
| Protein GI | 170732958 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.116676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTA GTACCGCCGC GCTTGCCGCG CGCGGGCTGT CGGTGGGATA TCGCGACCAT
GTCGTGATCG ACGGGCTGGA CCTGTCGATC GCGGCCGGCC GCGTAACCGC GCTGTGCGGA
CCGAACGGCT GCGGCAAGAG CACGCTGCTG CGCACGCTCG CGGGCCTGCA GCCCGCGCGT
GCCGGCCATG TCGAAGTGAA CGGCCAGCCG CTCGCGTCGT TTCGCCGTCG CGCGCTCGCG
CGCGAACTGA CGATGCTCGC GCAGTTCAAC CAGATTCCGT CGGGCCTCAC CGTGCGCGAG
CTCGTCGCGT ACGGGCGCTA TGCGTACGGC GGCTTCCTGC GCGGCCTGTC GCGCGCCGAT
CATGCGGCGA TCGACGAGGC GCTCGACACG AGCGGCCTCG CGGGCGACGC GGAGCGCGAC
GTCGGCGCGC TGTCGGGCGG CGAACGCCAG CGCGCGTGGA TCGCGATGGC GCTCGCGCAG
CAGGCGCCGA TCGTGCTGCT CGACGAACCG ACGACCTATC TCGACATTCA TCACCAGCTC
GACATCCTCG ATGCGCTGCG TGCGCTGAAC CGCGCGCGCG GGCTGACGAT CGTGTGGGTG
CTGCACGACC TGAACCAGGC GGCCGCGTAC AGCGACGAGA TCGTGCTGAT GCGCGCGGGC
CGCCTCGTCG CGCAGGGCAC GCCCGACGCG ATGCTCGACC CGGCGCGACT GCGCGCGGCG
TTCGGCGTCG AGATGCTGAA GCTCGCGCAT CCGCAGACGG GCGCGCCGAT GTGCGTGCCG
GCCTACGGGC CGTCGACCGA CGGCGCGCCG CAGGCGGCCG GCGTGTTCGA CCGGGATCTC
GCCGTATGA
|
|---|
| Protein sequence | MTRSTAALAA RGLSVGYRDH VVIDGLDLSI AAGRVTALCG PNGCGKSTLL RTLAGLQPAR
AGHVEVNGQP LASFRRRALA RELTMLAQFN QIPSGLTVRE LVAYGRYAYG GFLRGLSRAD
HAAIDEALDT SGLAGDAERD VGALSGGERQ RAWIAMALAQ QAPIVLLDEP TTYLDIHHQL
DILDALRALN RARGLTIVWV LHDLNQAAAY SDEIVLMRAG RLVAQGTPDA MLDPARLRAA
FGVEMLKLAH PQTGAPMCVP AYGPSTDGAP QAAGVFDRDL AV
|
|---|
| |