| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1602 |
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| Symbol | |
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| ID | 6123278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1772471 |
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| End bp | 1774957 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638183 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001764897 |
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| Protein GI | 170732950 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.334862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGAATCA GACATTCCTT CCTTTGCGTC TCCGTGCTGG TCGTCGGCAG CCAGAGCCAG
GCGACGGAAT TCAATTCGTC GTTCCTCGAC ATCGACGGCA CGAGCAACGT CGACCTGTCG
CAGTTCTCGC AGCCGGACTT CACGTTGCCC GGCGAGTACA TGCTCGACGT GCAGGTCAAC
GACCTGTTCT ACGGGCTGCA AGCGATCGAG TTCATCGCGC TCGACGCATC GGGCGCGGGC
AAGCCGTGCC TGCGGCCGGA ACTCGTCGCA CAGTTCGGGC TGAAGCCGTC GCTCGCGAAG
GACCTGCCGC GCTTCCAGGG CGGGCGGTGC GTCGATCTCG GCGCGATCGA GGGCGCGACC
GTGCGCTACC TGAAAAGCGA CGGGCGGCTC AAGATCACGA TTCCGCAGGC CGCGCTCGAG
TTCACCGATT CGACCTACCT GCCGCCGTCG CGCTGGTCCG AAGGCATTCC GGGTGCGATG
CTCGACTATC GCGTGATCGC GAACACGAAC CGCAACTTCG GGGCGGGCGG CGGGCAGACG
AATTCGATCC AGGCCTACGG GACGATCGGC GCGAACTGGG ATGCGTGGCG CTTTCGCGGC
GACTACCAGG CGCAATCGAA CGTGGGCAAC ACGGCGTACG CGGACCGCAC GTTCCGCTTC
AGCCGGCTTT ATGCGTTTCG CGCGCTGCCG TCGATCCAGT CGACGGTGAC GTTCGGCGAC
GACTACCTGA CCTCCGACAT CTTCGACACG TTCGCGCTGA CGGGCGCGTC GATCCGCAGC
GACGACCGCA TGCTGCCGCC GTCGCTGCGC GGCTATGCGC CGCTGATCTC GGGCGTCGCG
CGCACCAACG CGACCGTGAC CGTGTCGCAG GCCGGCCGCG TGCTGTACGT GACGCGCGTG
TCGCCGGGCG CGTTCGCGCT GCAGAACATC AACACGAGCG TGCAGGGCAC GCTCGACGTG
GCGGTCGAGG AAGAGGACGG CAGCGTGCAG CGCTTCCAGG TGACGACGGC CGCCGTGCCG
TTCCTCGCGC GTACCGGCCA GTTGCGCTAC AAGGCGGCGG TCGGCAAGCC GCGCCTGTTC
GGTGGCGGCG GCATCACGCC GTTCTTCGGC TTCGGTGAAA TCGCGTACGG CCTGCCGTTC
GACATCACCG CCTATGGCGG CTTCATCGCC GCATCGGGCT ACACGTCGGT TGCGCTCGGC
GTCGGCCGCG ATTTCGGCGC GTTCGGCGCG GTGTCGGCCG ACGTCACGCA CGCGCGGGCG
AAGCTGTGGT GGAGCGGCGC GACGCGCAAC GGCAACTCGT ACCGCATCAA CTATTCGAAG
CACTTCGACG GGCTCGATGC CGACGTGCGC TTCTTCGGCT ACCGCTTCTC CGAGCGCGAA
TATACGAACT TCGCGCAGTT CTCGGGCGAC CCGACGTCAT ACGGCCTCGC CAACAGCAAG
CAGCGCTATT CGGCGACGAT GTCGAAGCGC TTCGGCGACA CGTCGACCTA TTTCTCGTAC
GACCAGACGA CCTACTGGGC GCGTTCGTCC GAGCAGCGGG TCGGCCTGAC GCTCACGCGT
GCGTTCTCGA TCGGCACGCT GCGCAACCTG AACGTGAGCG TGTCGGCATT CCGCACGCAG
AGCGCGGGCG CGAGCGGCAA CCAGTTCTCG GTCACCGCGA CGCTGCCGAT CGGCGGCCGT
CACACCGTCA CGTCGAACCT GACGACGGGC AGCGGCAGCA CCAGCGCGAA CGCAGGTTAC
ATCTACGACG ATTCGGCCGG CCGTACCTAC CAGGTCAACG CGGGCGCGAC CGACGGCCGC
GCGTCGGCGA ACGCGAGCTT CCGCCAGCGC ACGTCGGCGT ACCAGCTCAA CGCGCAGGCG
TCGACGCTCG CCAATGCGTA TGCGGCCGCG TCGCTCGAAG TCGACGGCTC GTTCGTCGCG
ACGCAGTACG GCGTGTCCGC GCACGCGAAC GGCAATGCGG GCGATACGCG GCTGCTGGTG
TCGACCGACG GCGTGCCCGA CGTGCCGCTG TCCGGCACGC TCACGCATAC CGATTCGCGC
GGCTACGCGG TGCTCGACGG CATCTCGCCG TACAACGTGT ACGACGCGAC CGTCAACGTC
GAGAAGCTGC CGCTCGAAGT GCAGGTGACG AACCCGATCC AGCGCATGGT GCTGACCGAC
GGCGCGATCG GCTTCGTGAA GTTCTCCGCC GCGCGCGGCA GCAACCTGTA CCTGACGCTG
ACCGATGCGG CCGGCAAGCC GCTGCCATTC GGTGCGTCGG TGCAGGACGC GGCGAACGGC
AAGGAACTCG GCATCGTCGG CGAGGGCGGT GCGGCGTTCC TGACCCAGGT CCAGCCGAAA
TCCACGCTGG CGGTGCGGGC GGGCGAACGG ACGCTCTGCA CGGTCGACGC ACTGCCGAAC
CAGCTTCAAC TCGAAGGCAC GCCGATCCCG GTGACGTGCC AGCCGCCCGG CGAGTCGCAT
GCAGCGGCCG CGCGGGTCGA ACGATGA
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| Protein sequence | MRIRHSFLCV SVLVVGSQSQ ATEFNSSFLD IDGTSNVDLS QFSQPDFTLP GEYMLDVQVN
DLFYGLQAIE FIALDASGAG KPCLRPELVA QFGLKPSLAK DLPRFQGGRC VDLGAIEGAT
VRYLKSDGRL KITIPQAALE FTDSTYLPPS RWSEGIPGAM LDYRVIANTN RNFGAGGGQT
NSIQAYGTIG ANWDAWRFRG DYQAQSNVGN TAYADRTFRF SRLYAFRALP SIQSTVTFGD
DYLTSDIFDT FALTGASIRS DDRMLPPSLR GYAPLISGVA RTNATVTVSQ AGRVLYVTRV
SPGAFALQNI NTSVQGTLDV AVEEEDGSVQ RFQVTTAAVP FLARTGQLRY KAAVGKPRLF
GGGGITPFFG FGEIAYGLPF DITAYGGFIA ASGYTSVALG VGRDFGAFGA VSADVTHARA
KLWWSGATRN GNSYRINYSK HFDGLDADVR FFGYRFSERE YTNFAQFSGD PTSYGLANSK
QRYSATMSKR FGDTSTYFSY DQTTYWARSS EQRVGLTLTR AFSIGTLRNL NVSVSAFRTQ
SAGASGNQFS VTATLPIGGR HTVTSNLTTG SGSTSANAGY IYDDSAGRTY QVNAGATDGR
ASANASFRQR TSAYQLNAQA STLANAYAAA SLEVDGSFVA TQYGVSAHAN GNAGDTRLLV
STDGVPDVPL SGTLTHTDSR GYAVLDGISP YNVYDATVNV EKLPLEVQVT NPIQRMVLTD
GAIGFVKFSA ARGSNLYLTL TDAAGKPLPF GASVQDAANG KELGIVGEGG AAFLTQVQPK
STLAVRAGER TLCTVDALPN QLQLEGTPIP VTCQPPGESH AAAARVER
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