| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1600 |
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| Symbol | |
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| ID | 6123276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1769561 |
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| End bp | 1771012 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641638181 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001764895 |
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| Protein GI | 170732948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.375157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTTG CGCTGAATGC ACGTGGCGCG CTGCGGGCAC CGCTCGCGCT GGCCGCCGCG
CTCGCGCTCG CCGGGTGTTC GCTCGCGCCG CGTTACGAGC GTCCGGCGGC GCCGGTGCCG
GGGGCCTATG CGCCGGTCGA TGGCGGCACG ACGCCGGCCA CCGCGCAGGA TGCCGCGCTG
CTCGACGACT GGCATGCGTA TTTCACCGAT CCGGCGCTGC AGGCGTGGAT CGAAGCGGCG
CTCGCGAACA ACCGCGACCT CCGGATCGCC GCCGGCCGGC TCGAGGAAGC GCGTGCGCTG
TACGGCGTGC AGCGCGCGGA CCGGATGCCG TCGGTCGATG CGAATCTCGG CTATGAGCGC
GCGCGCCAGT ACGACCCGGT CGTGCGGGAA AGCGCGATCA GCGGGCTGTA TCGCGCGGGT
GTCGGCGTCA GCGCGTACGA GCTCGACCTG TTCGGCCGCG TGCGCAGCCT GTCCGACGCG
GCGCTCGCCG ACTATTTCGC GACGGCCGAT GCGCAGCGCA CGGTTCGCAT CGGCGTGATC
GCCGAAGTGG CGGGCGCGTA CGTTTCCGAA CGATCGTTGC ACGAGCAACT GGCGCTCGCC
CAGCGCACGC TCGATGCGCG CGAGCGGATG GCCGCGCTCA CGCAACGCCG CTATGCCGCC
GGCACGAGCG ACGCGATCGA GCTGCGTTCG GCCGAGATGC TGGTGGCGTC CGCGCGCGCG
TCGCAGGCCG GGCTGCAGCG CGAGCATGCG CAGGCCGTCC GCGCGCTGCA ACTGCTGGCG
GGCGATTTCG CGCGCACGGT GCCGGACGAT GCGACCGCGC TCGATTCGCT GTCGATCGCG
CCCGTGGCGC CGGGTGCGCC GAGCCAGTTG CTCGAACGGC GGCCGGATAT CCGGCAGGCC
GAGGGGCGGC TGAAGGCCGC GAACGCGAAC ATCGGCGCGG CGCGCGCGGC GTTCTTCCCG
CGCATCGCGC TGACGACCGA CTACGGCTCG GTGAGCGACG CGTTCTCGAA CCTGTTCGCG
GCCGGCACGA GCGTATGGAC GTTCGCGCCG CGCATCACGC TGCCGATCTT CGCGGGCGGA
CGCAATCGCG CGAACCTCGA CGTCGCGCAC GCGCGCAAGG ACATTGCGGT CGCCGAATAC
GAGAAGGCGG TGCAGACCGC GTTTCGCGAA GTGGCCGATG CGTTCGCCGC GCGCGACTGG
GTCGACCGGC AGCTGGCCGC GCAGCAGGAC GTGTATGCGG CGGACGGCGC GCGGCTGAAG
CTCGCGGAGC GTCGTTATGC GGGCGGTGTC GCGACCTATC TCGAACTGCT CGACGCGCAG
CGCAGCACGT ACGAGTCGGG GCAGGAGCTG ATTCGGCTCA GGCAGCTCAG GCTCGCGAAT
GCGATCGCGC TGTATCGCGC GCTCGGCGGC GGCTGGGCGC CGACCACGAC GGAGGCCGCG
GCTTCCGCGT GA
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| Protein sequence | MMFALNARGA LRAPLALAAA LALAGCSLAP RYERPAAPVP GAYAPVDGGT TPATAQDAAL
LDDWHAYFTD PALQAWIEAA LANNRDLRIA AGRLEEARAL YGVQRADRMP SVDANLGYER
ARQYDPVVRE SAISGLYRAG VGVSAYELDL FGRVRSLSDA ALADYFATAD AQRTVRIGVI
AEVAGAYVSE RSLHEQLALA QRTLDARERM AALTQRRYAA GTSDAIELRS AEMLVASARA
SQAGLQREHA QAVRALQLLA GDFARTVPDD ATALDSLSIA PVAPGAPSQL LERRPDIRQA
EGRLKAANAN IGAARAAFFP RIALTTDYGS VSDAFSNLFA AGTSVWTFAP RITLPIFAGG
RNRANLDVAH ARKDIAVAEY EKAVQTAFRE VADAFAARDW VDRQLAAQQD VYAADGARLK
LAERRYAGGV ATYLELLDAQ RSTYESGQEL IRLRQLRLAN AIALYRALGG GWAPTTTEAA
ASA
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