Gene Bcenmc03_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1597 
Symbol 
ID6123273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1764407 
End bp1765054 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID641638178 
ProductTetR family transcriptional regulator 
Protein accessionYP_001764892 
Protein GI170732945 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.703325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.531377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA AGACCCGGGA AGAATCGCTC GCCATCAAGC ACCGGATCCT CGACGCCGCC 
GAGCTCGTGC TGCTCGAAAG AGGCGTCGCG CAAACCGCGA TGGCGGACCT TGCCGAGGCC
GCCGGGATGT CGCGGGGCGC CGTCTACGGC CACTACCGCA ACAAGATGGA AGTGTGTCTG
GCGATGTGCG ACCGCGCGTT CGCCCGCACG TCGGAAGGGT TCGACGCGGG CGACGGCCTG
CCGCCGTTCG CGACGCTGCG GCGTGCCGCG TCGCACTACC TGCAGGAATG CGGCGAGCCG
GGCCCGATGC AGCGCGTGCT CGTGATTCTC TATACGAAGT GCGAGCAGAG CGAGGAGAAC
GGCGCGCTGC AGCGGCGCCG CATGCTGCTG GAGCTGCAGA TGCTGCGGAT CACGAAGGCG
CTGCTGCGTC GCGCGATCTC CGCCGGCGAA CTTGCCGTCG ATCTCGACGT GCACCTCGCC
GCCGTCTATC TCGTGTCGCT GCTCGAAGGC GTGTTCGCGT CGATGATCTG GACCAACCGG
TTGCGCGGCA ACCTGTGGAA CGACGCCGAG GCGATGCTCG ACGCCGGCTT CGATGCCGTG
CGCACCTCCG CCGCCCTGCG CCGATGCGCG CAAAAATTGC CGGACTGA
 
Protein sequence
MARKTREESL AIKHRILDAA ELVLLERGVA QTAMADLAEA AGMSRGAVYG HYRNKMEVCL 
AMCDRAFART SEGFDAGDGL PPFATLRRAA SHYLQECGEP GPMQRVLVIL YTKCEQSEEN
GALQRRRMLL ELQMLRITKA LLRRAISAGE LAVDLDVHLA AVYLVSLLEG VFASMIWTNR
LRGNLWNDAE AMLDAGFDAV RTSAALRRCA QKLPD