Gene Bcenmc03_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1586 
Symbol 
ID6123262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1748746 
End bp1749777 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID641638167 
ProductLacI family transcription regulator 
Protein accessionYP_001764881 
Protein GI170732934 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.122412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.650271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TCAAGGATGT GGCGGCCATG GCGGGCGTGT CGTTTACGAC CGTCTCGCAC 
GTGGTGAACA ATTCGCGGCC GGTGTCCGCG GATGTGCGTG CGAAGGTCGA GGGCGCGATC
CGCGAGCTGA ATTACGTGCC GTCGGCCGTG GCGCGCTCGC TGAAGGCGCG GGCGACGGCG
ACGATCGGCC TCGTCGTGCC GAACAGCACG AATCCGTACT TCGCCGAGCT GGCGCGCGGC
ATCGAGGATC AGTGCGCGGC CAACGGCTAT TGCGTGTTCT TCTGCAATTC GGACGACGAT
CCCGTGAAGC AGCGCAACTA CCTGCGCGTG CTGCAGGAAA AGCGCATCGA CGGGCTGATC
GTCGCGTCGG CGGGCGAGGA CGCGGTGCTC GCGCAGACGC TCGCGGATAT CCATGCGCCG
CTCGTCGTGG TCGACCGCAA CATCGAGGGG CTCGCGGCCG ATCTCGTGCA GATCGACCAC
GAGCGCGGCG CGTATCTCGC GACGCGCCAC CTGCTCGAAC TCGGGCACGC GAAGATCGGC
TGCATCACGG GGCCGACCGA CACCGCCGTC AGCGCGATGC GCGTGCACGG CTTCATCCGC
GCGATGGCCG AGCGCGGCGT CGATATCGTG CCGGGCGCGA TCGCCGAAAG CGATTTCTCA
TGCCTGGGCG GCTATCACGC GGCGTCGCGG CTGTTCGAAT CGGTGCGGCC GAGCGCGATC
TTCGCGGGCA ACGACCTGAT GGGCGTCGGC GCGCTGCGCG CGGCGGCCGA GCGCGGGATG
CGCGTGCCCG ACGACTGCTC GATCATCGGC TTCGACGACA TCGAATTTTC CCGCTACACG
TATCCGGCGC TGTCGACGGT CGGCCAGTCG GTGCGCGCGC TCGGCGAAAT GGCCGCGCAG
ACGCTGATCG AACGGATCGG CGGCGGTTCG AGCGCCGTGC CGAGCCGCCG TCGCGTCGTG
TCGCCGCGCC TCGTGCTGCG CGAATCGACG GCAATCTACC GCGAGCCGGC CGCGCCGGGC
GCTCGCGCAT GA
 
Protein sequence
MATIKDVAAM AGVSFTTVSH VVNNSRPVSA DVRAKVEGAI RELNYVPSAV ARSLKARATA 
TIGLVVPNST NPYFAELARG IEDQCAANGY CVFFCNSDDD PVKQRNYLRV LQEKRIDGLI
VASAGEDAVL AQTLADIHAP LVVVDRNIEG LAADLVQIDH ERGAYLATRH LLELGHAKIG
CITGPTDTAV SAMRVHGFIR AMAERGVDIV PGAIAESDFS CLGGYHAASR LFESVRPSAI
FAGNDLMGVG ALRAAAERGM RVPDDCSIIG FDDIEFSRYT YPALSTVGQS VRALGEMAAQ
TLIERIGGGS SAVPSRRRVV SPRLVLREST AIYREPAAPG ARA