Gene Bcenmc03_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1584 
Symbol 
ID6123260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1746081 
End bp1747694 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content71% 
IMG OID641638165 
ProductABC transporter related 
Protein accessionYP_001764879 
Protein GI170732932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.133672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGA CCTTCCAACC CTCCCGTTCA GCCCATCCCG TGCTGTCCGT ATCCGGCATC 
GGCAAGACCT ATGCCGAACC CGTGCTCGCC GACGTCACGC TGACGCTCGA CGCGGGCCAG
GCGCTCGCGC TGACGGGCGA GAACGGCGCA GGCAAGAGCA CGCTGTCGAA AATCATCGGC
GGGCTCGTCG ACCCGACCAC CGGCACGATG CAACTCGGCG GTGAGGCGTA CGCGCCGGCG
AGCCGCACGC AGGCCGAGGC GCTCGGTGTG CGCATGGTGA TGCAGGAGCT GAACCTGCTG
CCGACGCTGA GCGTCGCCGA AAACCTGTTC CTGAACCGCC TGCCGCGGCG CTTCGGGATC
ATCGATCGCG CGCGGTTGCG CGACGACGCG CGTGCCGCGA TGGCGCAGGT CGGGCTCGAC
GCGGTCGACC CCGATACGCC GGTCGGCGCG CTCGGCATCG GCCACCAGCA GATGGTCGAG
ATCGCGCGCA ACCTGATCGG CGACTGCCGC GTGCTGATTC TCGACGAGCC GACCGCGATG
CTGACCGCGC GCGAAGTCGA GCTGCTGTTC GAGCAGATCG ACCGGCTGAA GGCGCGCGGC
GTCGCGATCG TCTACATCTC GCACCGGCTC GAAGAGCTCG CGCGCGTCGC CGAGCGCGTC
GCGGTGCTGC GCGACGGCCG GCTCGTGCAC GCGGGCGACA TGGCGACGAC GACGTCCGAT
GGGCTCGTCA CGCTGATGGT CGGGCGCGAG GTCGGCGAAC ACATCGATCT CGGCGAGCGT
CGCTTCGGCG CGCCGCGGCT CGCGGTCTCG GGCCTCACGC GCGGCGCGGC GGTGCGCGAC
GTGTCGCTCG AGGTGCGCGC GGGCGAGATC TTCGGCATCT CGGGGCTGAT CGGCGCGGGA
CGCACCGAAC TGCTGCGGCT GATCTACGGC GCCGATACGC CGGATGCCGG AACGATCGCG
GTCGGCCAGC CGCTGAAGCC GGCGCGCATC GCGTCGCCGG TCGACGCGGT GAAGCTGGGC
ATCGCGCTGA TCACCGAGGA TCGCAAGGGC GAAGGGCTGC TGCTGTCGCA GTCGATCACC
GCGAACGTAT CGCTCGGCCA GCTCGACCGG CTCGCGCGCG GCGGCATCGT CGATGCCGCA
CGCGAAACGG CGCTCGCCGA GCAGCAGATC GATGCGCTGC GAATCCGTAC GCATGGGGCG
GCGCAGCCGG TCGGCGAATT GTCGGGCGGC AACCAGCAGA AGGTCGTGAT CGGCCGCTGG
CTCGCGCGCG ACATGGGTGT GCTGCTGTTC GACGAGCCGA CGCGCGGGAT CGACGTCGGC
GCCAAATTCG AGATCTACAC TTTGATGGGC GCGCTCGCGC GGGAAGGCCG CGCGCTGGTG
GTCGTATCGA GCGACCTGCG CGAGCTGATG CTGATCTGCG ACCGGATCGG CGTGATGTCG
GCCGGGCGCA TGACCGCCGT GTTCGAGCGC GGCAACTGGA CCCAGGATGC GCTGCTGGCC
GCGGCGTTCG CCGGCTTCGG CCGCGAGACG CCGGCGGCCG CCATGCAGCA TCCGGACGCG
GGGCAGGCGC GCGGCGCCGC TCCGGGCACT TCGACGACAG GACCACAGCA ATGA
 
Protein sequence
MEPTFQPSRS AHPVLSVSGI GKTYAEPVLA DVTLTLDAGQ ALALTGENGA GKSTLSKIIG 
GLVDPTTGTM QLGGEAYAPA SRTQAEALGV RMVMQELNLL PTLSVAENLF LNRLPRRFGI
IDRARLRDDA RAAMAQVGLD AVDPDTPVGA LGIGHQQMVE IARNLIGDCR VLILDEPTAM
LTAREVELLF EQIDRLKARG VAIVYISHRL EELARVAERV AVLRDGRLVH AGDMATTTSD
GLVTLMVGRE VGEHIDLGER RFGAPRLAVS GLTRGAAVRD VSLEVRAGEI FGISGLIGAG
RTELLRLIYG ADTPDAGTIA VGQPLKPARI ASPVDAVKLG IALITEDRKG EGLLLSQSIT
ANVSLGQLDR LARGGIVDAA RETALAEQQI DALRIRTHGA AQPVGELSGG NQQKVVIGRW
LARDMGVLLF DEPTRGIDVG AKFEIYTLMG ALAREGRALV VVSSDLRELM LICDRIGVMS
AGRMTAVFER GNWTQDALLA AAFAGFGRET PAAAMQHPDA GQARGAAPGT STTGPQQ