Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1583 |
Symbol | |
ID | 6123259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1744985 |
End bp | 1745935 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641638164 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001764878 |
Protein GI | 170732931 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0401008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGTCC GCTTTCGCCG TCGCTTCCTG ACCGCCGCGC TCGCCGCCGT CGCGGTGGCC GCCGCACCGG CCGTCCACGC GCAATCCGCG GCCAAGCCGA AGGTCGCGCT CGTGATGAAG TCGCTCGCCA ACGAGTTCTT CCTGACCATG GAAACGGGCG CGAAGGAATA CCAGAAGCAC AACGCGAACC AGTTCGACCT GATCACCAAC GGCATCAAGG ACGAGACCGA CACCGCGAAC CAGATCCGCA TCGTCGAGCA GATGATCGTC TCGAAGGTCG ATGCGATCGT GCTCGCGCCG GCCGATTCGA AGGCGCTCGT GCCGGTCGTG AAGAAGGCCG TGGACGCCGG CATCGTCGTC GTGAACATCG ACAACCGGCT CGATCCCGAC GTGCTGAAGT CGAAGAACCT GAACGTGCCG TTCGTCGGCC CGGACAACCG CAAGGGCGCG CGCAAGATCG GCGATTACCT CGCGAAGCGG CTGAAGGCGG GCGACCAGGT CGGCATCGTC GAAGGCGTGT CGACGACGAC CAACGCGCAG CAGCGCACGG CCGGCTTCCA GGACGCGATG AAGGCGGGCG GAATGAAGGT CGTATCGGTG CAGTCGGGTG AATGGGAGAT CGACAAGGGC AATGCGGTGG CCGCCGCGAT GCTCAACGAA TACCCGAACC TGAAGGCGCT GCTGTGCGGC AACGACAACA TGGCGATCGG CGCCGTGTCG GCCGTGCGCG CGGCCGGCAA GCAGGGCAAG GTGCTCGTGG TCGGCTACGA CAACATCAAC GCGATCAAGC CGATGCTGAA GGACGGCCGC GTGCTCGCGA CCGCCGACCA GTACGCGGCG AAGCAGGCCG TGTTCGGCAT CGACACCGCG CTCAAGGCGA TCGCCGAGCA TCGCAAGCAG GCCGACATGT CCGGCGTGGT CGAGACGCCG GTGGATCTCG TGACGAAGTA A
|
Protein sequence | MNVRFRRRFL TAALAAVAVA AAPAVHAQSA AKPKVALVMK SLANEFFLTM ETGAKEYQKH NANQFDLITN GIKDETDTAN QIRIVEQMIV SKVDAIVLAP ADSKALVPVV KKAVDAGIVV VNIDNRLDPD VLKSKNLNVP FVGPDNRKGA RKIGDYLAKR LKAGDQVGIV EGVSTTTNAQ QRTAGFQDAM KAGGMKVVSV QSGEWEIDKG NAVAAAMLNE YPNLKALLCG NDNMAIGAVS AVRAAGKQGK VLVVGYDNIN AIKPMLKDGR VLATADQYAA KQAVFGIDTA LKAIAEHRKQ ADMSGVVETP VDLVTK
|
| |