Gene Bcenmc03_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1583 
Symbol 
ID6123259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1744985 
End bp1745935 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID641638164 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001764878 
Protein GI170732931 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0401008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCC GCTTTCGCCG TCGCTTCCTG ACCGCCGCGC TCGCCGCCGT CGCGGTGGCC 
GCCGCACCGG CCGTCCACGC GCAATCCGCG GCCAAGCCGA AGGTCGCGCT CGTGATGAAG
TCGCTCGCCA ACGAGTTCTT CCTGACCATG GAAACGGGCG CGAAGGAATA CCAGAAGCAC
AACGCGAACC AGTTCGACCT GATCACCAAC GGCATCAAGG ACGAGACCGA CACCGCGAAC
CAGATCCGCA TCGTCGAGCA GATGATCGTC TCGAAGGTCG ATGCGATCGT GCTCGCGCCG
GCCGATTCGA AGGCGCTCGT GCCGGTCGTG AAGAAGGCCG TGGACGCCGG CATCGTCGTC
GTGAACATCG ACAACCGGCT CGATCCCGAC GTGCTGAAGT CGAAGAACCT GAACGTGCCG
TTCGTCGGCC CGGACAACCG CAAGGGCGCG CGCAAGATCG GCGATTACCT CGCGAAGCGG
CTGAAGGCGG GCGACCAGGT CGGCATCGTC GAAGGCGTGT CGACGACGAC CAACGCGCAG
CAGCGCACGG CCGGCTTCCA GGACGCGATG AAGGCGGGCG GAATGAAGGT CGTATCGGTG
CAGTCGGGTG AATGGGAGAT CGACAAGGGC AATGCGGTGG CCGCCGCGAT GCTCAACGAA
TACCCGAACC TGAAGGCGCT GCTGTGCGGC AACGACAACA TGGCGATCGG CGCCGTGTCG
GCCGTGCGCG CGGCCGGCAA GCAGGGCAAG GTGCTCGTGG TCGGCTACGA CAACATCAAC
GCGATCAAGC CGATGCTGAA GGACGGCCGC GTGCTCGCGA CCGCCGACCA GTACGCGGCG
AAGCAGGCCG TGTTCGGCAT CGACACCGCG CTCAAGGCGA TCGCCGAGCA TCGCAAGCAG
GCCGACATGT CCGGCGTGGT CGAGACGCCG GTGGATCTCG TGACGAAGTA A
 
Protein sequence
MNVRFRRRFL TAALAAVAVA AAPAVHAQSA AKPKVALVMK SLANEFFLTM ETGAKEYQKH 
NANQFDLITN GIKDETDTAN QIRIVEQMIV SKVDAIVLAP ADSKALVPVV KKAVDAGIVV
VNIDNRLDPD VLKSKNLNVP FVGPDNRKGA RKIGDYLAKR LKAGDQVGIV EGVSTTTNAQ
QRTAGFQDAM KAGGMKVVSV QSGEWEIDKG NAVAAAMLNE YPNLKALLCG NDNMAIGAVS
AVRAAGKQGK VLVVGYDNIN AIKPMLKDGR VLATADQYAA KQAVFGIDTA LKAIAEHRKQ
ADMSGVVETP VDLVTK