Gene Bcenmc03_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1577 
Symbol 
ID6123253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1738257 
End bp1738904 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID641638158 
ProductLexA repressor 
Protein accessionYP_001764872 
Protein GI170732925 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.810756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TCACCGCCCG TCAGCAGCAA GTGTTCGACT TGATCCGTCG CGCGATCGAG 
CGCTCCGGAT TCCCGCCCAC CCGTGCCGAG ATCGCGGCCG AACTGGGCTT CAGCTCGCCG
AATGCGGCCG AGGAGCACCT GCGCGCGCTG GCTCGCAAGG GCGTGATCGA GCTGGCCGCC
GGCGCATCGC GCGGCATCCG GCTGCTCGGC ATCGACGACG CCCCGCACCA GTTCACGCTG
CCGCATGCCG GCCTGATGCA ACTGTCGCTG CCGCTCGTCG GCCGCGTCGC GGCCGGTAGC
CCGATCCTTG CGCAGGAGCA CATCTCGCAG CACTACGCGT GCGATCCCGC GCTGTTCACC
AGCAAGCCCG ACTACCTGTT GAAGGTGCGC GGCCTGTCGA TGCGCGACGC CGGCATTCTC
GACGGCGACC TCCTCGCCGT GCAGAAGCGC ACGGAAGCGA AGGACGGCCA GATCATCGTC
GCGCGTCTCG GCGACGACGT CACGGTCAAG CGGCTGATGC GCCGGCCCGG CGGCCTCGAG
CTGATCGCGG AGAACCCGGA TTACGAAAAC ATCTTCGTCA AGGCCGGCAG CGCGGATTTC
GCGCTGGAAG GCATCGCCGT CGGGCTGATC CGCTCGGGCG AACTCTGA
 
Protein sequence
MTKLTARQQQ VFDLIRRAIE RSGFPPTRAE IAAELGFSSP NAAEEHLRAL ARKGVIELAA 
GASRGIRLLG IDDAPHQFTL PHAGLMQLSL PLVGRVAAGS PILAQEHISQ HYACDPALFT
SKPDYLLKVR GLSMRDAGIL DGDLLAVQKR TEAKDGQIIV ARLGDDVTVK RLMRRPGGLE
LIAENPDYEN IFVKAGSADF ALEGIAVGLI RSGEL