Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1566 |
Symbol | |
ID | 6123242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1727791 |
End bp | 1729077 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638147 |
Product | major facilitator transporter |
Protein accession | YP_001764861 |
Protein GI | 170732914 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGA CCACCCTGAC CTCGCAGGAC GCCGCGCGCC CCAGCGCCGC GAAGATCCGG CGCATCATCT TCGCGGCGTC GATCGGCAAC GCACTCGAAT GGTTCGACCT GATCGTCTAC GGCTTCTTCG CGGTCACGAT CGCCAAGCTG TTCTTCCCCG CCACGAGCGA AGCGACGTCG CTGATGCTGA CGCTCGGTAC GTTCGGGCTG TCCTACCTGA TCCGGCCGAT CGGCGGCTTC GTGCTCGGCG CGTACGCGGA CCGCGCGGGC CGCAAGGCGT CGCTGCTGCT GTCGATCGCG ATGATGATGG CCGGCACGCT GCTGATCGCG CTGATGCCGA CCTACGCATC GATCGGCATT CTCGCGCCGC TCGGGATCAT GCTGTCGCGG CTGATGCAGG GCTTTTCCGC CGGCGGCGAA TTCGCGAGTT CGACCGCGTT TCTCGTCGAG CACGCGCCGC AGCGGCGCGG CTTCATGTCG AGCTGGCAGT TCGCGAGCCA GGGCCTCGCG ACGTTGCTCG CGTCGGGCTT CGGCGCGCTG CTGACGGCCA CGCTGACCAC CGCGCAACTC GAAAGCTGGG GCTGGCGCGT GCCGTTCCTG TTCGGCCTCG CGATCGGCCC GGTCGGGCTG TACATCCGCC GCTACGTCGA CGAAGGCGTC GAGTTCAAGA CGCAGGCGCG CTCCGAAGCG CCGGTGCGCG AACTGTTCGC GGACCAGAAG GTGCGCCTGC TGTTGTCGGT CGGCGCGCTC GTGATCTCGA CCGCGATCAA CTACATGATC CTGTACATGC CGACCTACGC GATCAAGCAG CTCGGGCTGC CCGCATCGAC CGGTTTCGCG GCGACGCTCG CGACCGGCTT CGTGCTGACG CTCGTCACGC CGGTCGTCGG CCATCTGTCC GACAGCACCG GGCGAATCCG CATGATGGCG GTCGCGGCCG TGCTGATGCT GCTGACCGTG TGGCCGACGT TCGCCTGGCT CACGCGCCAC GCGTCGTTCG CGACGATGCT CGCCGCACTG GTCTGGATCG GCGCGCTGAA GGCGATGTAC TGCGGCGCGC TGCCGGCGCT GATGGCCGAA CTGTTCCCGT CGCAGACGCG CGCCACCGGG CTCGCGGTCA GCTACAACAC CGGCGTCACG CTGTTCGGCG GCTTCGCGCC GTTCGTCATC ACCTGGCTGA TCAGCACGAC CGGCAACCGG CTGTCGCCGG CGCTCTATCT GATGGGGTGT GCGCTGCTGA GCCTCGCCGC ACTGTTCGTC GCGCGCACGC GGCTGAAGAT GCGCTGA
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Protein sequence | MNTTTLTSQD AARPSAAKIR RIIFAASIGN ALEWFDLIVY GFFAVTIAKL FFPATSEATS LMLTLGTFGL SYLIRPIGGF VLGAYADRAG RKASLLLSIA MMMAGTLLIA LMPTYASIGI LAPLGIMLSR LMQGFSAGGE FASSTAFLVE HAPQRRGFMS SWQFASQGLA TLLASGFGAL LTATLTTAQL ESWGWRVPFL FGLAIGPVGL YIRRYVDEGV EFKTQARSEA PVRELFADQK VRLLLSVGAL VISTAINYMI LYMPTYAIKQ LGLPASTGFA ATLATGFVLT LVTPVVGHLS DSTGRIRMMA VAAVLMLLTV WPTFAWLTRH ASFATMLAAL VWIGALKAMY CGALPALMAE LFPSQTRATG LAVSYNTGVT LFGGFAPFVI TWLISTTGNR LSPALYLMGC ALLSLAALFV ARTRLKMR
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