Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1529 |
Symbol | |
ID | 6123207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1697959 |
End bp | 1698753 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641638110 |
Product | extracellular solute-binding protein |
Protein accession | YP_001764826 |
Protein GI | 170732879 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.890695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT CGCTGCTGAA GAAGTTGCTG GTTGCCGGCG TGATCGGCAC GTCGTTCGCC GCGGCGACCG CGCACGCGGC CGACCTCCTC GACCAGGTCA AGCAACGCGG CACGCTGCGC GTCGGCCTCG AGGGCACGTT CCCGCCGTTC AACTCGAAGA GCCCGCAAGG CGAGCTCGTC GGCTTCGACG TCGACATCGC GAAGGCCGTC GCCGCGAAGC TCGGCGTGAA GGCCGAGTTC GTGACGACCG AATGGAGCGG CATCATCGCT GGCCTGCAGG CCGGCAAGTT CGACGTGATC GCCAACCAGG TCGGCATCAC CGACAAGCGC AAGGAAACGC TCGACTTCTC GCCGGCGTAT ACGTACTCGT CCGCGCAGCT GATCCAGCGC AAGGACGACA CGCGCCAGTT CAAGTCGCTG GAAGACCTGA AGGGCAAGAA GCTCGGCGTC GCGCTCGGCA CGAACTACAT GGACATGGCG AAATCGGTGC CGGGCATCGA CGTGAAGACG TACCCGGGCG CGCCCGAGTA CCTGCGCGAT CTCGCGGCCG GCCGCCTCGA CGCGGCGCTC AACGACCGCC TGATGCTCGC GTACCTGACG AAGAATTCGC AGCTGCCGCT GCGCCCGGGC GCGAACGTCG GTTCGGCGAA CCCGTCGGGC ATCCCGTTCA AGAAGGGCAA CCCGAAGTTC CAGAAGGCGA TCGACGACGC GATGGCGCAA CTCGAGGCCG ACGGCACGTT CACGAAGATC TCCGACAAGT GGTTCGGCAT CGACGTGACG AAACCGATCA AGTAA
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Protein sequence | MKFSLLKKLL VAGVIGTSFA AATAHAADLL DQVKQRGTLR VGLEGTFPPF NSKSPQGELV GFDVDIAKAV AAKLGVKAEF VTTEWSGIIA GLQAGKFDVI ANQVGITDKR KETLDFSPAY TYSSAQLIQR KDDTRQFKSL EDLKGKKLGV ALGTNYMDMA KSVPGIDVKT YPGAPEYLRD LAAGRLDAAL NDRLMLAYLT KNSQLPLRPG ANVGSANPSG IPFKKGNPKF QKAIDDAMAQ LEADGTFTKI SDKWFGIDVT KPIK
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