Gene Bcenmc03_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1525 
Symbol 
ID6123203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1694300 
End bp1694995 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID641638106 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001764822 
Protein GI170732875 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.541798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG ACGAACTCAA ACGCCTCGTC GGCCAGGCCG CCGCCGATTA CGTGATCCAG 
AACGTGCCCG AAGGCGCCGT GATCGGTGTC GGCACCGGCT CGACCGCCAA CTGCTTCATC
GACGCGCTCG CCGCCGTCAA ATCGCGCTAT CGCGGCGCCG TGTCGAGCTC GATTGCGACG
ACCGAACGCC TGAAATCGCA CGGCATCAAG GTGTTCGACC TGAACGAGAT CGAGTCGCTG
CAGGTGTACG TCGACGGCGC CGACGAGATC GACGCCGGCG GCGCGATGAT CAAGGGCGGC
GGCGGCGCGC TGACGCGCGA GAAGATCGTC GCATCGGTGG CCGACACGTT CGTCTGCATC
GCGGACGCCA GCAAGCGCGT GCCGGTGCTC GGCGCGTTCC CGCTGCCGAT CGAGGTCGTG
CCGATGGCGC GCACGGCGAT CGGCCGGCGC GTGACCGCGC TCGGCGGCGT GCCCGTGCTG
CGCGTGACGA AGGACGGCGC ACCCTACATC ACCGACAACG GCAACGAGAT CATCGACGTG
AAGGGCCTGC AGATCGCCGA TCCGCGCGGT TTCGAAGCGC AGGTGAACGC ATGGCCGGGC
GTCGTGACGG TCGGTCTGTT CGCCGAACGC GGCGCGAATC TGTGCTTGCT TGGCACGGAA
AACGGCGTTG AAACGATCGT TTATCCGGCT GGCTAA
 
Protein sequence
MTQDELKRLV GQAAADYVIQ NVPEGAVIGV GTGSTANCFI DALAAVKSRY RGAVSSSIAT 
TERLKSHGIK VFDLNEIESL QVYVDGADEI DAGGAMIKGG GGALTREKIV ASVADTFVCI
ADASKRVPVL GAFPLPIEVV PMARTAIGRR VTALGGVPVL RVTKDGAPYI TDNGNEIIDV
KGLQIADPRG FEAQVNAWPG VVTVGLFAER GANLCLLGTE NGVETIVYPA G