| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1523 |
|---|
| Symbol | |
|---|
| ID | 6123201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1692469 |
|---|
| End bp | 1693212 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641638104 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001764820 |
|---|
| Protein GI | 170732873 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.289763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGTC TGAAGGTTCT TTACGGTTTT CATGCGGTGA CCGCACGTTT GCGGCACGAT
GCATCGACGG TGGCGGAGGT GCTGTACGAC CAGACGCGCC GCGACCGCCG CATGCAGGAC
TTCCTGCACG CCGCGAAGGA AGCGGGCGTG CGGCTGATCG CAGCCGACGA AACGCGCCTG
TGGGGCCTCG CGCACACCGA GCGCCATCAG GGTGTCGTCG CGCGCGTCGA GGACATGCCG
CTTGCGCAGA ACCTGTCCGA GCTGCTCGAC GGCATCAACG GGCCCGCGCT GCTGCTCGTG
CTCGACGGCG TCACCGATCC GCACAACCTC GGCGCGTGCC TGCGGGTCGC CGATTCGGCC
GGCGCGCATG CGGTGATCGC ACCGCGTGAC CGCGCGGTCG GCCTGAACGC GACCGCGGCC
AAGGTGGCGA GCGGCGCGGC CGACACGGTG CCGTACATCA CGGTGACGAA CCTCGCCCGC
GCGCTGCGCG AGCTGAAGGA AGCGGGGGTA TGGATCATCG GCACGTCGGA CGAGGCGCCG
GCGACGCTCT ACGAAACGAA GCTCGACGGC CCGGTCGCGC TCGTGATGGG CGCGGAAGGC
GAAGGCATGC GCCGGCTCAC GCGCGACACC TGCGACGAAG TGATGAGCAT CCCGATGGCC
GGCAGCGTGG AAAGCCTGAA CGTGTCGGTC GCCAGCGGTG TCTGCCTGTA CGAAGCCGTG
CGTCAGCGGC GCGTGAAGCG CTGA
|
|---|
| Protein sequence | MSRLKVLYGF HAVTARLRHD ASTVAEVLYD QTRRDRRMQD FLHAAKEAGV RLIAADETRL
WGLAHTERHQ GVVARVEDMP LAQNLSELLD GINGPALLLV LDGVTDPHNL GACLRVADSA
GAHAVIAPRD RAVGLNATAA KVASGAADTV PYITVTNLAR ALRELKEAGV WIIGTSDEAP
ATLYETKLDG PVALVMGAEG EGMRRLTRDT CDEVMSIPMA GSVESLNVSV ASGVCLYEAV
RQRRVKR
|
|---|
| |