Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1505 |
Symbol | |
ID | 6123183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1669483 |
End bp | 1670874 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641638083 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001764802 |
Protein GI | 170732855 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.826842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000199805 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAAATA CGCCCGCAAT CGAAGAGCTC GACCTGTACG TCTGGGAAGG CAAGGCGGAC ATCGTCGACC GCGTCGCCCG GTGCATGGCG AGCTTCGACG TCGAAGTGAT CCGCGCCGAC AACGCGGCGG TCTCGCCCGA GCGCGCCGCG TTGCGGCGGT CGCTGGCGAT CATCAGCGTG ACGATGATCG AGGGCGGCGC GGCATTCCTG CGCGACTGGC AGGCCAACAT CGGCATGCCG GTGGTCTGGG TCGGCGCGGC GCGCGACCAC GACGCGTCGC AGTATCCGCC CGAGTATTCG CACATCCTGC CGCTCGACTT CACCTGTGCC GAACTGCGCG GCATGATCGG CAAGCTCGTC ACGCAACTGC GGGCACACGC AGCCGAAACG TTGCAGCCGT CGGAACTCGT CGCGCACTCC GAATCGATGC AGGCGCTGCT GCACGAAGTC GATACGTTTG CCGACTGCGA CACCAACGTG CTGCTGCACG GCGAAACCGG CGTCGGCAAG GAGCGCATCG CGCAACTGCT GCACGAAAAG CATTCGCGCT ATCGGCACGG CGAATTCGTG CCGGTGAACT GCGGCGCGAT TCCGGACGGC CTGTTCGAAT CGCTGTTCTT CGGTCATGCG AAAGGGTCGT TCACGGGCGC GGTTGTTGCG CATAAAGGCT ATTTCGAGCA GGCGGCCGGC GGCACGCTGT TCCTCGACGA GGTGGGCGAT CTGCCGCTGT ACCAGCAGGT CAAGCTGCTG CGCGTGCTCG AGGACGGCGC GGTGCTGCGG GTCGGCGCGA CCGCGCCGGT CAAGGTCGAT TTCCGTCTGG TCGCGGCAAG CAACAAGAAG CTGCCGCAGC TCGTGAAGGA AGGGTTGTTC CGCGCGGATC TTTACTACCG GCTCGCGGTG ATCGAACTGA GCATTCCGTC GCTCGAAGAG CGCGGTGCGG TGGACAAGAT CGCGCTGTTC AAGTCGTTCG TCGCCCAGGT CGTGGGCGAG GAGCGGCTCG CCCAGTTGTC CGATCTGCCG TACTGGCTCA CGGATTCGGT CGCGGACAGT TATTTCCCCG GCAACGTGCG CGAACTGCGC AACCTGGCCG AGCGGGTCGG CGTGACGGTA CGGCAGACGG GCGGCTGGGA TGCCGCGCGG CTGCAGCGGC TGATCGCGCA TGCGCGCAGC GCGGCGCAGC CGGTGCCGGC GGAGAGCGCG GCCGAGGTGT TCGTCGATCG CAGCAAGTGG GACATGAACG AGCGCAACCG CGTGATCTCG GCGCTCGACG CAAACGGTTG GCGGCGTCAG GACACGGCCC AGCAGCTCGG CATCAGCCGC AAGGTATTGT GGGAAAAAAT GCGCAAATAT CAGATCTTCG ACGAAGAGCC CGAGACCCGC GAAAGTGAGT AA
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Protein sequence | MRNTPAIEEL DLYVWEGKAD IVDRVARCMA SFDVEVIRAD NAAVSPERAA LRRSLAIISV TMIEGGAAFL RDWQANIGMP VVWVGAARDH DASQYPPEYS HILPLDFTCA ELRGMIGKLV TQLRAHAAET LQPSELVAHS ESMQALLHEV DTFADCDTNV LLHGETGVGK ERIAQLLHEK HSRYRHGEFV PVNCGAIPDG LFESLFFGHA KGSFTGAVVA HKGYFEQAAG GTLFLDEVGD LPLYQQVKLL RVLEDGAVLR VGATAPVKVD FRLVAASNKK LPQLVKEGLF RADLYYRLAV IELSIPSLEE RGAVDKIALF KSFVAQVVGE ERLAQLSDLP YWLTDSVADS YFPGNVRELR NLAERVGVTV RQTGGWDAAR LQRLIAHARS AAQPVPAESA AEVFVDRSKW DMNERNRVIS ALDANGWRRQ DTAQQLGISR KVLWEKMRKY QIFDEEPETR ESE
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