| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1500 |
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| Symbol | |
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| ID | 6123178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1664446 |
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| End bp | 1665426 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641638078 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001764797 |
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| Protein GI | 170732850 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000537712 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAGCG CCACCTTGCT CGCGCTGATG TTCGCGTTGA TTTGCGCGGC GGCCGGGTTG
CTGCTGTGGC GCGGAAGCCA GGTGCGGGAA GGGCGTGCGC ATGCGCAGCG GTTCTTCGAC
AGCCGCGTCG GACAGGGCGC GCGCCCCGCC GCATCGGCTG GCGATACACG CACCGCGCGC
GCCCCGGCGG CCGGTACGGC GAACCCGCAG GAGCCCGAAC AAGGGTTCGC GCGCTGGCGT
GCGTCGGCGT TCAACGCATG GACCGTGCTG TCCGACCGTG CGGGCCTCGA TGAAGTCCGC
GCCGGACTCG TGCTGTCGCT GGCGATCGTG GTGCTGCTCG CACTGTGGGC CGGCATGGCC
GGCGGCGTGC TCGCCGCGGC GGCCGCGCTC GTCGCGGGCA GTGTGTTGGT CGTGCTGTGG
ATCACGTCAC GCATCAGCCG GCGCCGCCTG AAGATCGTCC GTCAGTTGCC GTCGTTTCTC
GACGGGATCG TACGGCTCGT GACGCTCGGG AACAGCGTGC CGGCGGCGTT CCAGTCGGCG
CTTCAGACGG CCGAAATGCC GCTGCGCCGC TGCCTCGACG ACGTGTCGCG AATGCTGCGC
TCCGGCGTCG ACATCGATCG CGCGATGCTG CACATCGCGC ACACGTACCG TATTCGCGAA
TTCGAACTGG TCGGCGCGGT ACTGCGTCTG TCGGTGCGCT ATGGCGGACG GGCGGACGTG
ATGCTCGACC GGATGTCGAC CTTCATGCGC GATCTCGAGC AGGCGGAACG CGAACTGTCC
GCGATGTCGG CCGAGACCCG GCTGTCCGCA TGGGTGCTGG CACTGTTGCC GATCGCGGTC
GGCAGCTTCG TCATTGCCAC GAGCCCGCGC TATTTCACGG CGATGTGGAA CGACGATACC
GGGCGTCAGT TGGTTTACCT GGCGTTCGTG CTGCAGGCGA TCGGCGGTTT CTGGCTGTTC
CGGCTCGCGC GGCTGAGGTG A
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| Protein sequence | MSSATLLALM FALICAAAGL LLWRGSQVRE GRAHAQRFFD SRVGQGARPA ASAGDTRTAR
APAAGTANPQ EPEQGFARWR ASAFNAWTVL SDRAGLDEVR AGLVLSLAIV VLLALWAGMA
GGVLAAAAAL VAGSVLVVLW ITSRISRRRL KIVRQLPSFL DGIVRLVTLG NSVPAAFQSA
LQTAEMPLRR CLDDVSRMLR SGVDIDRAML HIAHTYRIRE FELVGAVLRL SVRYGGRADV
MLDRMSTFMR DLEQAERELS AMSAETRLSA WVLALLPIAV GSFVIATSPR YFTAMWNDDT
GRQLVYLAFV LQAIGGFWLF RLARLR
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