Gene Bcenmc03_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1493 
Symbol 
ID6123171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1658185 
End bp1658355 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content55% 
IMG OID641638071 
ProductFlp/Fap pilin component 
Protein accessionYP_001764790 
Protein GI170732843 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000102149 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000902291 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGCAA TCATCAAGCG TTTCCTTAAG GAAGAAGACG GGGTTACCGC AGTCGAGTAC 
GGACTCATCG CAGGACTTAT CGCAGTCGCT CTCGTCACGG CCATGAGCAC GTTGACAACC
GGCATCTCGG GGGCGTTCTC CTACATCGCG AGCAAGCTGC CGTCGGTATA A
 
Protein sequence
MKAIIKRFLK EEDGVTAVEY GLIAGLIAVA LVTAMSTLTT GISGAFSYIA SKLPSV