| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1490 |
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| Symbol | |
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| ID | 6123168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1652524 |
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| End bp | 1654209 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641638068 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001764787 |
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| Protein GI | 170732840 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00938115 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000615286 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCCA GACTCGACAG ATGGATGATG CTGCTCGCCA TCGCGGCGGC AGGCACGGCA
CAGGCACAAA CGCGCGTCGG CGGTAACCCG CTCGACTCCC TTCCCCAGAT CAACGCACCG
AAGACGGGCC CGAACGTCAC CGTTCAGGTC GCGCCGCAGG CGCCGCAATT GCAGGAGCTG
CTGTCGCGGC ACCTGACGCC GAAGACGTTC CAGGTCGAAG GTGTGAAGTC GGTACCGTTC
GAGGAAATCA CGCGCCGCTT CACGCCGCTC GTCGGCAAGG ACATCACGAT CGGCGAGCTG
ATCGAAACCG CCAACGGCGT GACGAAGCTG TACCAGGAGC GCGGCTACGC GCTGTCGTTC
GCGTTCGTTC CCGCGCAGAC GTTCGAGGGC GGCGTCGTGC GCATCACGGT GGTCGAAGGC
TATGTGTCGG ACGTCAAGGT CACCGGCAAA CCCGGCGCGA TGGAACCGAA GATTCGCGCG
ATTGCCGCGC ACATCACGGC CGACCGGCCG CTGCGCCGGG CGACGTTCGA GCGCTACGTG
AACACGTTCG GCCTGCTGCC CGGCCTCACG GTGAAGGCGA ATGTCCCGCC GCCGCAAACC
ACCGACGGCG CGACGACGCT CGAGCTCGCG GTCGATCGCA AGCCGTTCAA CGTCAGCACG
GGGATCGACT TCAATCACCC GGGCGTCCAG GGTCTCATCA CCGCGACCGA AAACGGCCTG
ACGCGATTCG GCGAGCAACT GAGCATCTCG GCGCTCGCAC CGCCGGGACG CGACAAGCAA
ACCTACTTCG CGTTCAGCGG CGCCCTGCCC GTCGGCAGCA GCGGCCTGAT CACGCGACTC
GATGCCAGCA CGTATCGCGG CAAGCCGACC GACAACCCGG GGTTGCCGTC GACTATCGAG
CGCACCGTAA AGAACGAGAA ATTAGGTCTT TCGGCATCCT ATCCGATCTT GCTGAATAAC
CAGCGTAGCC TGCTCGGCAC CGTGTCGGGT TATGCGTCGC ATAACGAGGA CCGCTACCAG
AACAAGATCA ACGGTGCGAG CCTCGACAAC CGGTCGCAGG TTCGTGTTCT TCAACTGCAG
TTTGACTACA CGAGTGTCCA GCCGAAGCAG GTGCGCAAAT TGAGCGTCAA CGTTGCCAAA
GCATTCGATA TCCTCGGCGC ATCGAAATCG CAGATCGGCA CGAACGGAGG CACCACAACA
AACTACGACG ACCCGATCTC GCTGACCTTC GTTCGCACCG GCGCGACTTT CACGCAGACG
AACGAATGGC CGTTCCGGAT CGGCACGTCG GTTTCGCTGA CCGGGCAATA CAGTCCCGAC
TCGCTGCCGA CGTCCGAACA GATCTCGTTC GGCTCGACCC GTTACGCACT CGGCTACCAG
CCGGGCGAAA CATCGGGCGA CTCGGGCTGG GGGATGTCTC TGGAAGTCAA CCGCGGCTTC
ACGCCGGGCT GGACGTATCT GAAATCGATC ACGCCATACA TCGCATACGA CATGGCGCGC
GTGTATCTGC ACTCAGGCAC GCCGTCACCG AACCGCATGT CGTCGGTCGG CATCGGCGTG
CGGCTCACGG ACAGCCGCTA CTACAGTCTC GACCTGAACG TCGCCAAACC GGTGGGCGAT
GCACCGGTCG AAAGCGCGTC ACGCAGCCCG CGCATCAACG CCGCGTTCTC CTATCAGCTC
AACTGA
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| Protein sequence | MKSRLDRWMM LLAIAAAGTA QAQTRVGGNP LDSLPQINAP KTGPNVTVQV APQAPQLQEL
LSRHLTPKTF QVEGVKSVPF EEITRRFTPL VGKDITIGEL IETANGVTKL YQERGYALSF
AFVPAQTFEG GVVRITVVEG YVSDVKVTGK PGAMEPKIRA IAAHITADRP LRRATFERYV
NTFGLLPGLT VKANVPPPQT TDGATTLELA VDRKPFNVST GIDFNHPGVQ GLITATENGL
TRFGEQLSIS ALAPPGRDKQ TYFAFSGALP VGSSGLITRL DASTYRGKPT DNPGLPSTIE
RTVKNEKLGL SASYPILLNN QRSLLGTVSG YASHNEDRYQ NKINGASLDN RSQVRVLQLQ
FDYTSVQPKQ VRKLSVNVAK AFDILGASKS QIGTNGGTTT NYDDPISLTF VRTGATFTQT
NEWPFRIGTS VSLTGQYSPD SLPTSEQISF GSTRYALGYQ PGETSGDSGW GMSLEVNRGF
TPGWTYLKSI TPYIAYDMAR VYLHSGTPSP NRMSSVGIGV RLTDSRYYSL DLNVAKPVGD
APVESASRSP RINAAFSYQL N
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