Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1490 |
Symbol | |
ID | 6123168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1652524 |
End bp | 1654209 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641638068 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001764787 |
Protein GI | 170732840 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00938115 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000615286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATCCA GACTCGACAG ATGGATGATG CTGCTCGCCA TCGCGGCGGC AGGCACGGCA CAGGCACAAA CGCGCGTCGG CGGTAACCCG CTCGACTCCC TTCCCCAGAT CAACGCACCG AAGACGGGCC CGAACGTCAC CGTTCAGGTC GCGCCGCAGG CGCCGCAATT GCAGGAGCTG CTGTCGCGGC ACCTGACGCC GAAGACGTTC CAGGTCGAAG GTGTGAAGTC GGTACCGTTC GAGGAAATCA CGCGCCGCTT CACGCCGCTC GTCGGCAAGG ACATCACGAT CGGCGAGCTG ATCGAAACCG CCAACGGCGT GACGAAGCTG TACCAGGAGC GCGGCTACGC GCTGTCGTTC GCGTTCGTTC CCGCGCAGAC GTTCGAGGGC GGCGTCGTGC GCATCACGGT GGTCGAAGGC TATGTGTCGG ACGTCAAGGT CACCGGCAAA CCCGGCGCGA TGGAACCGAA GATTCGCGCG ATTGCCGCGC ACATCACGGC CGACCGGCCG CTGCGCCGGG CGACGTTCGA GCGCTACGTG AACACGTTCG GCCTGCTGCC CGGCCTCACG GTGAAGGCGA ATGTCCCGCC GCCGCAAACC ACCGACGGCG CGACGACGCT CGAGCTCGCG GTCGATCGCA AGCCGTTCAA CGTCAGCACG GGGATCGACT TCAATCACCC GGGCGTCCAG GGTCTCATCA CCGCGACCGA AAACGGCCTG ACGCGATTCG GCGAGCAACT GAGCATCTCG GCGCTCGCAC CGCCGGGACG CGACAAGCAA ACCTACTTCG CGTTCAGCGG CGCCCTGCCC GTCGGCAGCA GCGGCCTGAT CACGCGACTC GATGCCAGCA CGTATCGCGG CAAGCCGACC GACAACCCGG GGTTGCCGTC GACTATCGAG CGCACCGTAA AGAACGAGAA ATTAGGTCTT TCGGCATCCT ATCCGATCTT GCTGAATAAC CAGCGTAGCC TGCTCGGCAC CGTGTCGGGT TATGCGTCGC ATAACGAGGA CCGCTACCAG AACAAGATCA ACGGTGCGAG CCTCGACAAC CGGTCGCAGG TTCGTGTTCT TCAACTGCAG TTTGACTACA CGAGTGTCCA GCCGAAGCAG GTGCGCAAAT TGAGCGTCAA CGTTGCCAAA GCATTCGATA TCCTCGGCGC ATCGAAATCG CAGATCGGCA CGAACGGAGG CACCACAACA AACTACGACG ACCCGATCTC GCTGACCTTC GTTCGCACCG GCGCGACTTT CACGCAGACG AACGAATGGC CGTTCCGGAT CGGCACGTCG GTTTCGCTGA CCGGGCAATA CAGTCCCGAC TCGCTGCCGA CGTCCGAACA GATCTCGTTC GGCTCGACCC GTTACGCACT CGGCTACCAG CCGGGCGAAA CATCGGGCGA CTCGGGCTGG GGGATGTCTC TGGAAGTCAA CCGCGGCTTC ACGCCGGGCT GGACGTATCT GAAATCGATC ACGCCATACA TCGCATACGA CATGGCGCGC GTGTATCTGC ACTCAGGCAC GCCGTCACCG AACCGCATGT CGTCGGTCGG CATCGGCGTG CGGCTCACGG ACAGCCGCTA CTACAGTCTC GACCTGAACG TCGCCAAACC GGTGGGCGAT GCACCGGTCG AAAGCGCGTC ACGCAGCCCG CGCATCAACG CCGCGTTCTC CTATCAGCTC AACTGA
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Protein sequence | MKSRLDRWMM LLAIAAAGTA QAQTRVGGNP LDSLPQINAP KTGPNVTVQV APQAPQLQEL LSRHLTPKTF QVEGVKSVPF EEITRRFTPL VGKDITIGEL IETANGVTKL YQERGYALSF AFVPAQTFEG GVVRITVVEG YVSDVKVTGK PGAMEPKIRA IAAHITADRP LRRATFERYV NTFGLLPGLT VKANVPPPQT TDGATTLELA VDRKPFNVST GIDFNHPGVQ GLITATENGL TRFGEQLSIS ALAPPGRDKQ TYFAFSGALP VGSSGLITRL DASTYRGKPT DNPGLPSTIE RTVKNEKLGL SASYPILLNN QRSLLGTVSG YASHNEDRYQ NKINGASLDN RSQVRVLQLQ FDYTSVQPKQ VRKLSVNVAK AFDILGASKS QIGTNGGTTT NYDDPISLTF VRTGATFTQT NEWPFRIGTS VSLTGQYSPD SLPTSEQISF GSTRYALGYQ PGETSGDSGW GMSLEVNRGF TPGWTYLKSI TPYIAYDMAR VYLHSGTPSP NRMSSVGIGV RLTDSRYYSL DLNVAKPVGD APVESASRSP RINAAFSYQL N
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