Gene Bcenmc03_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1448 
Symbol 
ID6123126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1602214 
End bp1603122 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID641638024 
ProductLysR family transcriptional regulator 
Protein accessionYP_001764745 
Protein GI170732798 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0364851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTGA TCGACGATTT CCCCGCGCTC GATACCTTCG CGCGGATCGT GTCGGCCGGC 
AGCCTGTCGG CGGCGGCGCG CGAGCTCGAC CTGTCGTTGT CGGTCGTCAG CAAGCGGCTC
GCGCATCTCG AGTCGCGACT CGGCGTGCGC CTGCTGCACC GGACGACGCG GCAGCAGACG
CTCACCGACG ACGGCGCGCA GTTTCATGCG CAGGTGCTGC GCATCCTGGC CGAAGTCGAG
CATGCGGAAA CGCTGATGCG CGACCGCCGC GGTACGGTCA GCGGCGTGCT GCGCGTGACG
GCGCCCGGCG AACTCGGCCG CCTGCGAATC GCGCCGCTCG TCGCGGCATT TCAGCAGCGG
CATCCGCAAT TGACCGTGCA GTTGATGCTG ACCGATGCGG TCGTCGATCT GCTCGCAGCC
GACATCGACG TCGCCGTGCG GATCGGCAAT CTTGCCGATT CGACGATGAT CGCGCGCGAG
CTGGCGCCGA ATCACCGCGT GCTGTGCGCG TCGCCGGGCT ATCTCGCGGC GCACGGCTGG
CCGGCCCATC CGGCCGAGCT GCGTGCGCAT CGATGCATCG TGATGGGCGA CCAGCCGCGT
GCCGAATGGC GGTTCGATGG CGCGCAAGGC GGCGTGGCGG TCGAGGTGAC GGCCGCGCTG
CTGACCAACG ACGGCGGCGC GGCGCGCACG CTGGCGCTCG AAGGCGCGGG CATTGCGTTG
AAGTCGATCT GGGACGTCGG CGCCGATCTC GACGCCGGCC GGCTCGTGCG CGTGCTGCCG
GCCTTCGAGG CATCCGCCGC GCCATTGCAT GCCGTTTATC CCGGCGCTCG CCATGTGCCG
TTGCGGGTGC GGACGTTCGT CGATTTCCTG CGCGAGCAGT TGCGGGACGC GTGGCGTCGC
CACGATTGA
 
Protein sequence
MTLIDDFPAL DTFARIVSAG SLSAAARELD LSLSVVSKRL AHLESRLGVR LLHRTTRQQT 
LTDDGAQFHA QVLRILAEVE HAETLMRDRR GTVSGVLRVT APGELGRLRI APLVAAFQQR
HPQLTVQLML TDAVVDLLAA DIDVAVRIGN LADSTMIARE LAPNHRVLCA SPGYLAAHGW
PAHPAELRAH RCIVMGDQPR AEWRFDGAQG GVAVEVTAAL LTNDGGAART LALEGAGIAL
KSIWDVGADL DAGRLVRVLP AFEASAAPLH AVYPGARHVP LRVRTFVDFL REQLRDAWRR
HD