| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1444 |
|---|
| Symbol | |
|---|
| ID | 6123122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1599032 |
|---|
| End bp | 1599673 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641638020 |
|---|
| Product | 3-oxoacid CoA-transferase, B subunit |
|---|
| Protein accession | YP_001764741 |
|---|
| Protein GI | 170732794 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.085725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGA ATCGTGACCA GATGGCCGCG CGCGCGGCGA AGGAACTGCA GGACGGCTTC
TACGTGAACC TCGGCATCGG CCTGCCGACG CTCGTCGCGA ACCACGTGCC GGAAGGCGTC
GAGGTGTGGC TGCAGTCGGA GAACGGCCTG CTCGGCATCG GCCCGTCGCC GACCGAGGAC
GAAGTCGACG CCGATCTGAT CAACGCCGGC AAGCAGACCG TCACGACGCT GCCCGGTTCG
TCGATCTTCT CGTCGGCCGA TTCGTTTGCG ATGATCCGCG GCGGCCACAT CAACCTCGCG
ATCCTCGGCG CGATGCAGGT CAGCAAGCAG GGCGACCTCG CGAACTGGAT GATCCCGGGC
AAGATGATCA AGGGGATGGG CGGCGCGATG GACCTCGTCG CGGGAGTGGG GCGTGTCGTC
GTGCTGATGG AGCATGTCGC AAAGGGCGAT CAGCACAAGA TCCTCGAAGA ATGCAACTTG
CCGCTCACGG GTGTCGGCGT GGTCGACCTG ATCATCACCG ATCTCGGCGT GATCGAAGTG
ACGCCGGCCG GGTTGAAGGT GCTCGAACTG GCCGACGGCG TGAGCGCCGA CGAGATCCAG
GCGAAGACGG GCGCACCGCT CGACGTCAGC GCCGTGGCCT GA
|
|---|
| Protein sequence | MAWNRDQMAA RAAKELQDGF YVNLGIGLPT LVANHVPEGV EVWLQSENGL LGIGPSPTED
EVDADLINAG KQTVTTLPGS SIFSSADSFA MIRGGHINLA ILGAMQVSKQ GDLANWMIPG
KMIKGMGGAM DLVAGVGRVV VLMEHVAKGD QHKILEECNL PLTGVGVVDL IITDLGVIEV
TPAGLKVLEL ADGVSADEIQ AKTGAPLDVS AVA
|
|---|
| |