| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1438 |
|---|
| Symbol | |
|---|
| ID | 6123116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1593085 |
|---|
| End bp | 1594185 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641638014 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_001764735 |
|---|
| Protein GI | 170732788 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCA ATACCCTCGG CACGCTTTTC ACTGTCACGA CCTTCGGCGA ATCGCACGGT
CCCGCGATCG GCTGCGTGAT CGACGGCTGC CCGCCGGGGA TGGGGCTGAC CGAAGCCGAT
ATCCAGATCG AACTCGATCG CCGCAAGCCG GGCACGTCGC GGCACGTGAC GCAACGGCAG
GAGGCCGACG AGGTCGAGAT CCTGTCGGGC GTGTTCGAAG GCGTGACGAC CGGCACGCCG
ATCGCGCTGC TGATCCGCAA CACCGACCAG CGCAGCAAGG ACTACGGCAA CATCGTCGAG
ACGTTCCGTC CCGGCCACGC CGACTACACC TACTGGCAGA AATACGGCAT CCGCGACTAC
CGCGGCGGCG GTCGCTCGTC CGCGCGCCTC ACCGCGCCGA TCGTCGGCGC CGGTGCGGTC
GCGAAGAAGT GGCTGCGCGA GCGCTTCGGG GTCGAGGTGC GCGGCTACAT GAGCGGCCTC
GGCGAAATCG ACGTGCCGTT CGTCGACTGG TCGTACGTGC ACGAGAATCC GTTCTTCTCG
CCGAACGCGG CGGTCGTGCC GGAGCTCGAA GCGTACATGG ATGCGCTGCG CAATGATGGC
GATTCGATCG GCGCGCGCAT CGACGTCGTC GCGTCGGGCG TGCCGGTCGG CTGGGGCGAA
CCGGTATTCG ACCGGCTCGA TGCCGATATC GCGAAGGCGA TGATGAGCAT CAACGCGGTG
AAGGGCGTCG AGATCGGCGC GGGCTTCGAC AGCGTCGCGC AGCGCGGCTC GGTGCATGGC
GACGAACTGA CGCCGGCCGG CTTCGTCGGC AACCACGCGG GCGGCGTGCT CGGCGGGATT
TCGACGGGGC AGGACATCAC CGTGTCGATC GCGATCAAGC CGACGTCGAG CATCCGCACG
CCGCGCCGCT CGATCACGAA GAGCGGCGAC GAGGCGACGG TCGAAACCTT CGGCCGCCAC
GATCCGTGCG TCGGCATTCG TGCGACGCCG ATCGCCGAAT CGATGCTCGC GCTGGTGCTG
ATCGACCATG CGCTGCGCCA TCGCGCGCAG TGCGGCGACG TCGAGACGTC GACGCCGAAG
ATCGCCGGCA GCGCGACCTG A
|
|---|
| Protein sequence | MSGNTLGTLF TVTTFGESHG PAIGCVIDGC PPGMGLTEAD IQIELDRRKP GTSRHVTQRQ
EADEVEILSG VFEGVTTGTP IALLIRNTDQ RSKDYGNIVE TFRPGHADYT YWQKYGIRDY
RGGGRSSARL TAPIVGAGAV AKKWLRERFG VEVRGYMSGL GEIDVPFVDW SYVHENPFFS
PNAAVVPELE AYMDALRNDG DSIGARIDVV ASGVPVGWGE PVFDRLDADI AKAMMSINAV
KGVEIGAGFD SVAQRGSVHG DELTPAGFVG NHAGGVLGGI STGQDITVSI AIKPTSSIRT
PRRSITKSGD EATVETFGRH DPCVGIRATP IAESMLALVL IDHALRHRAQ CGDVETSTPK
IAGSAT
|
|---|
| |