Gene Bcenmc03_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1407 
Symbol 
ID6123085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1555676 
End bp1556602 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID641637983 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001764704 
Protein GI170732757 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.872133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AGATAGGTTG CGCCCCGTGC TGCTGGGGCG TCGACGACGT GAAGAACCCG 
CACCTGCCGC CGTGGCGGCA TGTGCTTGCC GAGGCCGCCC AGGCCGGCTA CTCGGGCATC
GAGCTCGGGC CGTACGGCTA CATCCCGCTC GAACTCGACG TGGTGAGCGC CGAGCTCGAA
CGCCAGCGCC TGAGCATCAC GGCCGGCACG ATCTTCGACG ATCTCGTGTC GCCGGAGAAC
CTGCCGAACC TGCTGCGCCA GACGCGCGAC ATCTGCGCGC TGATCACGCG GCTGCCGAAG
CTGCCGACCC AGGACGGCCA GCGCTACGCG GCGCCGTACC TGGTCGTGAT CGACTGGGGC
CACGAGGAGC GCGATTACGC GGCCGGCCAC GGCGATCGCG CGCCGCGGCT GTCCGACGCG
CGCTGGGCGC GGATGGTCGA CCATATCCGG CAGATCGCGA CGATCGCGCG CGACGAGTTC
GGCGTGCGCG CGGTGATCCA TCCGCATGCG GGCGGCTACA TCGAGTTCGC GGACGAGATC
GACCGGATCG TCGCCGACAT TCCGGCCGAC ACGGCGGGCC TGTGTCTCGA TACCGGCCAC
CTGCATTACT CGGGCATGGA CCCGGAAACG TGGTTGCGCC GCCATGCGGC ACGGCTCGAC
TACGTGCATT TCAAGGATAT CGACGCAGCC GTGTACGACG CGGTGATGGG CGAGCACATC
GCGTTCTTCG CGGCGTGCGC GCGCGGCGTG ATGTGCCCGA TCGGCACCGG CGTGCTCGAC
TACCCGGCGA TCCGCCAGGC GCTCGTCGAC ATCGGCTACG CCGGCTACAT CACGATCGAG
CAGGAGCGCG ACCCGCGCAA CGCCGGCACG AGCCTGCGCG ACGTCGCCGC GAGCCGCGCG
TTTCTCGCGT CGGCCGGTTT TGCATGA
 
Protein sequence
MTMKIGCAPC CWGVDDVKNP HLPPWRHVLA EAAQAGYSGI ELGPYGYIPL ELDVVSAELE 
RQRLSITAGT IFDDLVSPEN LPNLLRQTRD ICALITRLPK LPTQDGQRYA APYLVVIDWG
HEERDYAAGH GDRAPRLSDA RWARMVDHIR QIATIARDEF GVRAVIHPHA GGYIEFADEI
DRIVADIPAD TAGLCLDTGH LHYSGMDPET WLRRHAARLD YVHFKDIDAA VYDAVMGEHI
AFFAACARGV MCPIGTGVLD YPAIRQALVD IGYAGYITIE QERDPRNAGT SLRDVAASRA
FLASAGFA