| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1404 |
|---|
| Symbol | |
|---|
| ID | 6123082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1552572 |
|---|
| End bp | 1553597 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641637980 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001764701 |
|---|
| Protein GI | 170732754 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.952292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAACC TGAACCCGGT CGCGGATGCG CAGACCATGA CACTCAAGTC GCGGCATGCG
AAGTGGCCGC CCGAACTGAG CATCTTCCTG GTGCTGGTCG GCATCAGCCT GTTCTTCGAG
GTCGTCGGCT GGATCGTCGT CGGCCAGAGC TTCCTGTTCA ATGCCGAGCG GCTCGAGATC
ATCGTGCTGC AGATGGCCGT GATCGGCATC ATCGCGGTCG GCGTGAACCT CGTGATCATC
ACCAGCGGGA TCGACCTGTC GTCCGGGTCG GTCGTCGCGG CGGCCGCCGT CGTGTCGGCG
AGCCTCGCGC AGGTGTCCGA CTTCCCGCGC GCGGTGTTTC CGCACCTCAC CGACCTGCCG
GTCATCTGGC CGGTGCTGGC CGGCGTATGC GTCGGGCTGC TGGTGGGCCT CCTGAACGGC
ACGCTGATCG CGCTGACGGG CATCCCGCCG TTCATCGCGA CGCTCGGCAC GATGGTCGCC
GCGCGCGGCT TCGCGAAGTG GTTCACCAAC GGGATGCCGG TGTCGATGCT GACCGACCCG
TTCGCGGCGA TCGGCGCGGG GGCGAATCCG GTGATCATCT TCCTGGTGGT GGCGGCGATC
TTCCACGTCG TGCTGCGCTA CACGCGCTTC GGCAAGTACA CGTATGCGAT CGGCGCGAAC
CGCCATGCGG CCGTCGTGTC GGGCATCAAC GTCACGCGGC ACCTGATCTT CGTCTACGCG
ATCGCGGGCC TCCTGAGCGG GATCGCCGGC ACCGTGACGG CCGCGCGCGC GATCTCCGGC
CAGTCGGGCA TGGGCGTGAT GTACGAGCTC GATGCGATCG CGGCCGTCGT GATCGGCGGC
ACGTCGCTGT CGGGCGGCCT CGGCCGCGTG ACGGGCACCG TGATCGGCGT GCTGATCCTC
GGCGTGATGA CGTCGGGCTT CACGTTCATC CGCATCGACG CGTACTACCA GGAGATGGTG
AAGGGCGCGA TCATCGTCGC GGCCGTGATC GCCGACCAGT ACCGCAACAA GAAGTCGCGT
CGCTGA
|
|---|
| Protein sequence | MGNLNPVADA QTMTLKSRHA KWPPELSIFL VLVGISLFFE VVGWIVVGQS FLFNAERLEI
IVLQMAVIGI IAVGVNLVII TSGIDLSSGS VVAAAAVVSA SLAQVSDFPR AVFPHLTDLP
VIWPVLAGVC VGLLVGLLNG TLIALTGIPP FIATLGTMVA ARGFAKWFTN GMPVSMLTDP
FAAIGAGANP VIIFLVVAAI FHVVLRYTRF GKYTYAIGAN RHAAVVSGIN VTRHLIFVYA
IAGLLSGIAG TVTAARAISG QSGMGVMYEL DAIAAVVIGG TSLSGGLGRV TGTVIGVLIL
GVMTSGFTFI RIDAYYQEMV KGAIIVAAVI ADQYRNKKSR R
|
|---|
| |