| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1356 |
|---|
| Symbol | |
|---|
| ID | 6123034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 1494976 |
|---|
| End bp | 1496175 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641637932 |
|---|
| Product | diguanylate cyclase with GAF sensor |
|---|
| Protein accession | YP_001764653 |
|---|
| Protein GI | 170732706 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.305567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA TTGCGCCGTT GCCGCCGGAT GGCTGGAACG GCATACTGCC GGCGCGGTAC
GGCTGGCCGG GCACCGGCAC CGTTGCGTTG CGAACCACCC GGCACGCGCT GCCGCGAGCG
GCGCGTATGC TACCGCAAGC GCGCGCCGAG CGATGCACTT TTTCACGGAA AACTGACTTG
AATCAAACCG CCGACGCCGC CACGCCATCC CCCGACACAT TGTTGCGCAT CATCGCCGCG
CAAGCCGAAA TCGCGAAACT CGGCCTCGAC CTCGGCAGCG TGATGGCCTA CGTGGCCGAA
CAGGTGCCGC AGCTCACCGG CGCAAGCGCC GCCGCGGTCG AATTCGCCGA AGGCGACGAC
ATGGTGTACC GCGCCGCGTC GGGCACGGCC GCCGGGATGC TCGGCCTGCG GTTGCGGCGC
TCGGGCAGCC TGTCGGGCCT GTGCGTGCAG CAGGGCGAGT TGCTGCACTG TATCGATTCG
GAAACCGACC CGCGCGTCGA TCGCGATGCA TGCCGCCGGG TCGGCCTGCG CTCGATGCTC
GTGATGCCGC TCACGCACGC CGACACGACG GTCGGCGTGC TGAAGGTGAT GTCGCCGGAC
GTCGACGGTT TCTCACCGGC CGACGCCGGC ACGCTGCGGC TGATGGCGGA CCTGATCGCC
GCCGCGATGT TCCACGCGGC GCGCAACGAA GCGAACGAGC TGTACCTGCG CGCGACGCAC
GACGCGCTCA CGGGCCTGCC GAACCGCGCG CTGTTCTACG ACCGCCTGCG CCAGTCGATG
CACACGGCGC TGCGCGCGAG CGGCCGGCTC GGCATTCTCA ACATCGACAT GGACGGCCTG
AAGCCGATCA ACGACGGGTT CGGCCACCGC GCGGGCGACG CCGCGCTGCG CGAGGTCGCC
ACGCGGATGC AGGCCGCGGT GCGGCGCTCG GATACGGTCG CGCGCATCGG CGGCGACGAA
TTCGCGGTGA TCCTGCCGAA CCTCGGCACC CGCGACGACG CCCAGGTGCA AAGCATGCGG
CTCGCGCGGC GGGTCGGCGA GCCGTTCGAA TTCGACGGGC ATGCGCTGCG GCTCGGCGTC
AGCGTCGGCA TCGCGATGCT GCCGGACGAC GGCACCGACA TGAACGCGCT GATCGAGCAT
GCGGACCAGG CGATGTACGA AGCCAAGCGA TCGCGATCGC GGCGCACCAC GCACGCATGA
|
|---|
| Protein sequence | MARIAPLPPD GWNGILPARY GWPGTGTVAL RTTRHALPRA ARMLPQARAE RCTFSRKTDL
NQTADAATPS PDTLLRIIAA QAEIAKLGLD LGSVMAYVAE QVPQLTGASA AAVEFAEGDD
MVYRAASGTA AGMLGLRLRR SGSLSGLCVQ QGELLHCIDS ETDPRVDRDA CRRVGLRSML
VMPLTHADTT VGVLKVMSPD VDGFSPADAG TLRLMADLIA AAMFHAARNE ANELYLRATH
DALTGLPNRA LFYDRLRQSM HTALRASGRL GILNIDMDGL KPINDGFGHR AGDAALREVA
TRMQAAVRRS DTVARIGGDE FAVILPNLGT RDDAQVQSMR LARRVGEPFE FDGHALRLGV
SVGIAMLPDD GTDMNALIEH ADQAMYEAKR SRSRRTTHA
|
|---|
| |