Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1339 |
Symbol | |
ID | 6123017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1478876 |
End bp | 1479385 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641637915 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001764636 |
Protein GI | 170732689 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.427786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0741559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTG ACAAGCTGTC CCTCCGTCGA GAAATCGACG CCCTCTATGC CGGCCACCAC GCGTGGCTGC GCGGCTGGCT GAGCCGGAAG CTCGGTTGCG CGCACCGCGC GGCCGACCTG GCGCACGACA CGTTCGTGCG CCTGCTCGCA CGCGACGAGC CGATCGGCGC CGACGAGCCG CGCGCGTTCC TGACCACGGT CGCGCAGCGT GTGCTGAGCA ACCACTGGCG GCGCGAGCAG ATCGAGCGCG CGTATCTCGA CGTGCTCGCG CAGCGCCCGG AAGCGGTTGC GCCGTCGCCG GAAGAGCGGG CCGTCGTGGT CGAGACGCTG CTCGAGATCG ACCGGCTGCT CGACGGCCTG CCGCCCGCGG CGAAGCGTGC GTTCCTGTCC GCACAGCTCG ACGGGCTCAC GCAGGTCGAG ATCGCGCGCG AGCTCGGCGT GTCGCTCGCG ACGGTGAAGC GCTATCTCGT GAAGGCCGGC ACGCAGTGCT TCTTCGCGAT GGCGGCCTGA
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Protein sequence | MSADKLSLRR EIDALYAGHH AWLRGWLSRK LGCAHRAADL AHDTFVRLLA RDEPIGADEP RAFLTTVAQR VLSNHWRREQ IERAYLDVLA QRPEAVAPSP EERAVVVETL LEIDRLLDGL PPAAKRAFLS AQLDGLTQVE IARELGVSLA TVKRYLVKAG TQCFFAMAA
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