| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1338 |
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| Symbol | |
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| ID | 6123016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1477222 |
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| End bp | 1478382 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641637914 |
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| Product | porin |
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| Protein accession | YP_001764635 |
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| Protein GI | 170732688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.490298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0334295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA CGACCCTCTC GCTGATTTCG CTCGCGTCGT TCGCGGCGAT GCCCGTCGCG
CATGCGCAAT CGAGCGTCAC GCTGTATGGC GTGATCGATA CGTCGATCAC CTATGTGAAC
CACGCACAGG GCAAGGACAA CGCGTGGATG CTCGGCAACA GCAGCGCGGG CAACCTCGCC
GGCAGCCGCT GGGGCGTGAA AGGCACCGAG GATCTCGGCG GCGGGCTGAA GGCGCTGTTC
CAGCTGGAAA ACGGCTTCGA CCCGAGCAAC GGCCGGCAGG GCCAGGGCGG CCGCCTGTTC
GGCCGTCAGG CCTTCGTCGG CCTGACGAGC GACCGCTACG GCACGCTCAC GTTCGGCCGC
CAGTACGACC CGCTCGTCGA CCTCGTGCAG GGCATCACCG CCGACAACTA CCTGGGCAGC
GTGTTCGCGA CGCCGGGCGA CGTCGACAAC TACGACAACA GCTTCCGCGT CGACAACGCG
GTGAAGTACA CGTCGGCCGT CTATTCGGGC CTGCAGTTCG CGGCGATGTA TTCGTTCGGC
GGGATCGCCG GCAGCACCGG CGCCGCGCAG TCGTACTCGG CCGCCGTGTC GTACAACAAC
GGGCCGTTCA GCGTCGCGGG CGGCTACTTC CACGCGACCA ACAGCCCCGC GTCGAACGGC
GTGCGCAACG GCTGGACCAG CTCGTCGGAC GGCACGTTCG ACGGCCCGAT CAACAGCGGC
TATGCCAGCG CGCACTCGTT CGGCATCGCG CGCATCGCGG GCCAGTACGT CGCCGGCCCG
TTCACGTTCG GCGTCGGCTA CAGCAATGCG CAATACCGCC GCGACGCGAG CTCGGTGTTC
GGCTCGAACG AGCACTACAA CACGGGGCAA GGCTTCGTGA ACTACCAGGC GACGAACGCG
CTGCTCGTCG GTGTCGGCTA CAGCTACACG CGCTCGGGCG GCGACACGTC GGCGACCTAT
CACCAGGTAT CGGCCGGCGC CGACTACAGC CTGTCGAAGC GCACCGACGT CTACCTGACC
GCCGCGTATC AGCACGCGAG CGGCCAGACC GGCGACGGCA ATGGCGGCTC GATGGCCGCG
CAGGCATCGA TCGGCTCGTA CGGCTATGCG GGCACGAGCT CGCAGACGAT GGTCAACCTC
GGCCTGCGTC ACCGCTTCTG A
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| Protein sequence | MKRTTLSLIS LASFAAMPVA HAQSSVTLYG VIDTSITYVN HAQGKDNAWM LGNSSAGNLA
GSRWGVKGTE DLGGGLKALF QLENGFDPSN GRQGQGGRLF GRQAFVGLTS DRYGTLTFGR
QYDPLVDLVQ GITADNYLGS VFATPGDVDN YDNSFRVDNA VKYTSAVYSG LQFAAMYSFG
GIAGSTGAAQ SYSAAVSYNN GPFSVAGGYF HATNSPASNG VRNGWTSSSD GTFDGPINSG
YASAHSFGIA RIAGQYVAGP FTFGVGYSNA QYRRDASSVF GSNEHYNTGQ GFVNYQATNA
LLVGVGYSYT RSGGDTSATY HQVSAGADYS LSKRTDVYLT AAYQHASGQT GDGNGGSMAA
QASIGSYGYA GTSSQTMVNL GLRHRF
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