Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1331 |
Symbol | |
ID | 6123009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1469651 |
End bp | 1470643 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641637907 |
Product | periplasmic binding protein |
Protein accession | YP_001764628 |
Protein GI | 170732681 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.19897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCA TGCCGTTTCC TCTCCTGTCT TTCGTCGCCC GCCGGTTGGT CGCAGCTGTC GTGCTCGGCG GCGCGGCCGT GCACGCGCTC GCCTATCCCG TCACGGTGCG CAGTTGCGAT CGCGACGTGA CGTTCGAGCG TGCGCCGACG CGTGCGGTGA GCAACGACGT GAACCTGACC GAGATGATGC TCGCGCTCGG CCTGAAGGAC CGGCTCGTCG GCTATACGGG CATCGGCGGC TGGAAGACGG GCACCGCGCG CGTGCGCGAC GCGTTGCGCG GCGTGCCCGA ACTGGCGAGC CAGTATCCGT CGCTGGAAGT GCTGGCCGCC GCGCGCGCCG ACTTTTATCT CGCGGGCTGG AACTACGGGA TGCACGTCGG CGGGCCGGTG ACACCGGCGA CGCTCGCGCC GTTCGGCATC CGCACCTACG AACTGACCGA ATCGTGTTCG CACGTGATGA AGCAGTCGGC CGCGTCGTTC GACAACGTGT TCCGCGACCT GACCAATCTC GGCCGCATCT TCGGTGTCGA TGCGCGCGCC GCGCAGGTCG TCGCCGGGAT GCGCGCGCGG CTCGCGGCGG TGTCGCGCGC GATCGGGCAC CCGGCGCCGC TGCGCGTGTT CGTGTACGAC AGCGGCACCG ACAAGCCGAT GACCGCGGGC GGGCTCGCGA TGCCAACCGC GTTGCTCGCG GCGGCGGGCG CGCGCAACGT GATGGACGAC CTGCCGCGCA GCTGGACGCA GGTGAGCTGG GAAAGCGTGG TCGCGCGCGA TCCGCAGGTG ATCGTGATCG TCGACTATTC GGCGGTCACG GCCGCGCAGA AGCAGCAGTT CCTGTCGAGC CAGCCGGCGC TCGCGCGCGT GGCCGCGATT CGCGACCGGC GCTTCGTCAC GATTCCGTAC GATGCCGCGA CGCCCGGCCC GGAGAACGTC GCGGCGGTCG AGACGCTGGC CCGCGCGCTG TATCCGGCCG CCTTTGCCGG AGCGGCACGA TGA
|
Protein sequence | MTTMPFPLLS FVARRLVAAV VLGGAAVHAL AYPVTVRSCD RDVTFERAPT RAVSNDVNLT EMMLALGLKD RLVGYTGIGG WKTGTARVRD ALRGVPELAS QYPSLEVLAA ARADFYLAGW NYGMHVGGPV TPATLAPFGI RTYELTESCS HVMKQSAASF DNVFRDLTNL GRIFGVDARA AQVVAGMRAR LAAVSRAIGH PAPLRVFVYD SGTDKPMTAG GLAMPTALLA AAGARNVMDD LPRSWTQVSW ESVVARDPQV IVIVDYSAVT AAQKQQFLSS QPALARVAAI RDRRFVTIPY DAATPGPENV AAVETLARAL YPAAFAGAAR
|
| |