| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1284 |
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| Symbol | |
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| ID | 6122962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1410533 |
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| End bp | 1411783 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641637858 |
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| Product | major capsid protein HK97 |
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| Protein accession | YP_001764581 |
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| Protein GI | 170732634 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0461297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTGA ATGAAATCCG CGAGCAGAAG GCTCGCAAAA TCACCGAAAT GCGCGCGCTG
CTCACGAACG CCGAGCGCGA AAAGCGCAGC CTGTCGGCCG ACGAGCAAGC GAAGTTCGAC
GCACTGAAGG CCGACGTGAC GGCACTCGAA GCCGACGAGC AACGCGCGCA GTTCATGGCC
GATCTGGAAC GCCGCACGAT GGGCGACCGC GTGACGGCTA CCGACTTCGC AACCGTCGAA
AATCGCGTCG TGCTGCTCGA TGTGATCCGC GCCGGCATGG AAGGCCGCTC GCTCGATGGC
GCGGCGGCTG AGTTCGCACA GGAAACCGAG CGCCGCACCG GTCGCAAGGC GCAGGGCTTC
TATGTACCGA TGGCGGCATT CGATACGCGT CCGGTCGAGC AGCGCGACGC GCAGACCACG
ACGACGGCGG CCGGCATCGT CCCGAACGAC TTCCGCGCCG ATCAATTCAT CGGCCCCCTG
CGTAACGCGC TGGTGATGCG TGCGCTCGGC GCGCGCGTGC TGACTGGCCT GCGTGGAGAC
GTTGAAATTC CGAAGTTCAA AACCGGCATG ACGGCCGGCT GGGTGTCGGA AAACGAACCG
CTGCAACGCT CGGGCATGTC GTTCGACAAT CCCGTCACGC TCAAGCCGCG TCACGTCGGC
GCACTCACCG AGTTGTCCCG CCAGTTGATC CAGCAATCCA GCCCGGACAT TAACGGCCTG
GTGCGCGACG ACCTGTCGGC CGTGATGGGC GAAGCACTGG ATTCTGCGCT GCTGTCGGGC
GACGGCCAGA AACAGCCGCT CGGCCTGCTC AACATGGTCG GCATCCAAAC GGCCTCGCTC
GCGGCGCCAT CGTGGGACGG CGTGCAGCGC ATTGTCGAAA AGCTCGATCT GGTGAACGTC
AACGGCGGCC GCTGGCTGTC GAATCCGAGC GTCAAGCGCG TGCTGGCGAC GACGGAAAAG
GCCGCGAACA CGGGCATTTT CCTGACCGAT GGCGCGTCGC TGGCCGGCTA TCCGCTGGTG
ACGACGAATC AGGTCAAGGC GAAGGGCGGC GCTACGCCGA CCGGCCGCCT GATCTTCGGC
GATTTCTCGC AGCTGATTCT CGGCATCTGG AGCGAGGTCG ACATTCTTGT GAACCCGTAT
GCGGAAAGCG CCTACGAAAA GGGGAATGTG CTGGTGCGGG CAATGATGAC GTGCGATCAA
GCCGTGCGCC ATCCGGAAGC GTTCGTCGCC GTCGACGACG TGAAGATCTG A
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| Protein sequence | MRLNEIREQK ARKITEMRAL LTNAEREKRS LSADEQAKFD ALKADVTALE ADEQRAQFMA
DLERRTMGDR VTATDFATVE NRVVLLDVIR AGMEGRSLDG AAAEFAQETE RRTGRKAQGF
YVPMAAFDTR PVEQRDAQTT TTAAGIVPND FRADQFIGPL RNALVMRALG ARVLTGLRGD
VEIPKFKTGM TAGWVSENEP LQRSGMSFDN PVTLKPRHVG ALTELSRQLI QQSSPDINGL
VRDDLSAVMG EALDSALLSG DGQKQPLGLL NMVGIQTASL AAPSWDGVQR IVEKLDLVNV
NGGRWLSNPS VKRVLATTEK AANTGIFLTD GASLAGYPLV TTNQVKAKGG ATPTGRLIFG
DFSQLILGIW SEVDILVNPY AESAYEKGNV LVRAMMTCDQ AVRHPEAFVA VDDVKI
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