Gene Bcenmc03_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1266 
Symbol 
ID6122944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1388197 
End bp1388721 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID641637840 
Producthypothetical protein 
Protein accessionYP_001764563 
Protein GI170732616 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.23965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC TTTCGCTTTC TCCCGCCGAG CGCTCCGCGC TGCGCTCCCA GGCCCATGCG 
CTCAAGCCCG TCGTGCTGAT CGGCGCCGAA GGGCTGACCG ACGCCGTGCT GAAGGAAATC
AAGGTGCACC TCGACGCGCA CCAGTTGATC AAGATCCGCG TGTTCGGCGA CGAGCGCGAC
GAACGGATCG CGATCTACGA CGAGATCTGC GACCGCTTGA ACGCGGCCCC GATTCAGCAT
ATCGGCAAGC TGCTGGTGAT CTGGAGGCCC GAAGCCGCAG CGGCCCCGGC CCGCGGCCGC
CGTGCCGGTG CGCTGCCCAG CGCGGCAGAA GCCGCCGACG ACAAGAAAGG CCGCGCCCCG
CGCACCGTGA AGGTCGTCAA GGTGTCGCCG AACGCGAGCC CCGTGCGCCG TCCGAGGCCG
GTGAAGGTCA CGGTGCGCGG CAACGAACGC GTGACGGCAG GCGGCACCGT GAAGCGCGCG
AAAAAGCGCC AGGCCAGCAC CAAGCGGCCG TTCCAGGACA AGTAA
 
Protein sequence
MPALSLSPAE RSALRSQAHA LKPVVLIGAE GLTDAVLKEI KVHLDAHQLI KIRVFGDERD 
ERIAIYDEIC DRLNAAPIQH IGKLLVIWRP EAAAAPARGR RAGALPSAAE AADDKKGRAP
RTVKVVKVSP NASPVRRPRP VKVTVRGNER VTAGGTVKRA KKRQASTKRP FQDK