Gene Bcenmc03_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1259 
Symbol 
ID6122937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1378601 
End bp1380178 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content67% 
IMG OID641637833 
Productlytic transglycosylase catalytic 
Protein accessionYP_001764556 
Protein GI170732609 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000373485 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0984249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTTA TATTGAGTGC GATGGTGGTG CTGCTACTCG CCGCTTGTGC GAGCCAGCCC 
CCTGTCGCCA ACAACGCCGC CGATTCGCAG GCGACGTCCA ACTACCTCCG TAAATCAGCC
ACCGCCAAAG AAACTGTCGA CGTCGACAAG CAATCCGTCG GCGACCTGAC CACTGCAGAC
TCCGATCTCT GGGCGCGCAT TCGCCGCGGC TTCCAGATGC CCGACCTGCA GAGCGATCTC
GTCGACATGC AGACGACCTG GTATACGCAG CGTCCCGATT ACGTGCAGCG CATGACCGAG
CGCTCGCAGA AGTACCTGTA TCACATCGTC GAGGAACTCG AGGCGCGTCA CATGCCGACC
GAGCTCGCGC TGCTGCCGTT CATCGAATCC GCGTACAACC CGCAGGCGCT GTCGGTCGCG
AAGGCGGCCG GCATGTGGCA GTTCATGCCC GGCACCGGCC GCACGTACAA CCTGAAGCGC
AACATGTGGC AGGACGAGCG CCGCGACGTG CTCGCGTCGA CGAGTGCCGC GCTCGACTAC
CTGTCCCGCC TGCACGACAT GTTCGGCGAC TGGTATCTGG CGCTGGCCGC GTACAACTGG
GGCGAGGGCA ACGTGCAGCG CGCGATCGCG CGCAACCAGG CGGCCGGGCT GCCGACCGAC
TACCAGAACC TGCGGATGCC GAACGAGACG CGCAACTACG TGCCGAAGCT GCAGGCGGTG
AAGAACATCA TCGCGAGCCC GCAGCAGTAC GGCCTGACGC TGCCCGATAT CCCGAACCAT
CCGTATTTCG TGACGGTCAC GACGTCGCGC GACATCGACG TGGCGGTGGC CGCGAAGCTC
GCGAACCTGC CGCTCGACGA GTTCCGCTCG CTGAACCCGT CGTTCTCGAA GCCCGTGATC
CTCGGCGCGA CCGAGCCGCA GATCCTGCTG CCGTTCGACA ACGCATCCGC GTTCGAGAAG
AGCCTGAAAG CGTACAACGG CCAGTTGTCG TCGTGGACCA CCTACACGGT CAGCGAGCGT
GCACGCCCGG CCGCGATCGC CGAGAAGATC GGCGTCGATG CCGATACGCT GATGTCGGTC
AACAAGATTC CGGCCGGCAT GCGCCTGAAG CCGGGCTCGA CGATCGTCGT GCCGCGCGGC
AATGACGACG ACGAGGACAT CAGTGCCGAC GTCGCCGAAA ACGGCGCGCT CGCGATGGAG
CCGGACGTCC CCGATACGCG CAAGATGCTG ATCCGCGTGC GCCGCAAGCA GTCGATGGCG
GCGATCGCCG GCCGCTATGG CGTGTCGGTC GGCCAGTTGA AGGCGTGGAA CCGTACGCAC
CGCGATCTCG CGATGCCGGG CCAGGCGCTC GTGCTGCACG TGCCGGTCGG CCGTTCGGTG
CCGGCCGAGC CCGGTCCGGA GCGGATCGCG ACGTCGACGG GCGGTGCGCA CATCGAGCGC
GCGAGCCTGG CGGTGGGCGG CAAGTCGCAC GGCGGCAAGC GCGGCGGCGC CAAGTCGTCG
GCCCGGCCGG CGGCGAAGGC TGCGCCCGCG AAAGCCGCGC CGGCCAAGGC CGCCGCGCAC
AAGGGCAAGA AGAAGTAA
 
Protein sequence
MRLILSAMVV LLLAACASQP PVANNAADSQ ATSNYLRKSA TAKETVDVDK QSVGDLTTAD 
SDLWARIRRG FQMPDLQSDL VDMQTTWYTQ RPDYVQRMTE RSQKYLYHIV EELEARHMPT
ELALLPFIES AYNPQALSVA KAAGMWQFMP GTGRTYNLKR NMWQDERRDV LASTSAALDY
LSRLHDMFGD WYLALAAYNW GEGNVQRAIA RNQAAGLPTD YQNLRMPNET RNYVPKLQAV
KNIIASPQQY GLTLPDIPNH PYFVTVTTSR DIDVAVAAKL ANLPLDEFRS LNPSFSKPVI
LGATEPQILL PFDNASAFEK SLKAYNGQLS SWTTYTVSER ARPAAIAEKI GVDADTLMSV
NKIPAGMRLK PGSTIVVPRG NDDDEDISAD VAENGALAME PDVPDTRKML IRVRRKQSMA
AIAGRYGVSV GQLKAWNRTH RDLAMPGQAL VLHVPVGRSV PAEPGPERIA TSTGGAHIER
ASLAVGGKSH GGKRGGAKSS ARPAAKAAPA KAAPAKAAAH KGKKK