Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1259 |
Symbol | |
ID | 6122937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1378601 |
End bp | 1380178 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641637833 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001764556 |
Protein GI | 170732609 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000373485 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0984249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTTA TATTGAGTGC GATGGTGGTG CTGCTACTCG CCGCTTGTGC GAGCCAGCCC CCTGTCGCCA ACAACGCCGC CGATTCGCAG GCGACGTCCA ACTACCTCCG TAAATCAGCC ACCGCCAAAG AAACTGTCGA CGTCGACAAG CAATCCGTCG GCGACCTGAC CACTGCAGAC TCCGATCTCT GGGCGCGCAT TCGCCGCGGC TTCCAGATGC CCGACCTGCA GAGCGATCTC GTCGACATGC AGACGACCTG GTATACGCAG CGTCCCGATT ACGTGCAGCG CATGACCGAG CGCTCGCAGA AGTACCTGTA TCACATCGTC GAGGAACTCG AGGCGCGTCA CATGCCGACC GAGCTCGCGC TGCTGCCGTT CATCGAATCC GCGTACAACC CGCAGGCGCT GTCGGTCGCG AAGGCGGCCG GCATGTGGCA GTTCATGCCC GGCACCGGCC GCACGTACAA CCTGAAGCGC AACATGTGGC AGGACGAGCG CCGCGACGTG CTCGCGTCGA CGAGTGCCGC GCTCGACTAC CTGTCCCGCC TGCACGACAT GTTCGGCGAC TGGTATCTGG CGCTGGCCGC GTACAACTGG GGCGAGGGCA ACGTGCAGCG CGCGATCGCG CGCAACCAGG CGGCCGGGCT GCCGACCGAC TACCAGAACC TGCGGATGCC GAACGAGACG CGCAACTACG TGCCGAAGCT GCAGGCGGTG AAGAACATCA TCGCGAGCCC GCAGCAGTAC GGCCTGACGC TGCCCGATAT CCCGAACCAT CCGTATTTCG TGACGGTCAC GACGTCGCGC GACATCGACG TGGCGGTGGC CGCGAAGCTC GCGAACCTGC CGCTCGACGA GTTCCGCTCG CTGAACCCGT CGTTCTCGAA GCCCGTGATC CTCGGCGCGA CCGAGCCGCA GATCCTGCTG CCGTTCGACA ACGCATCCGC GTTCGAGAAG AGCCTGAAAG CGTACAACGG CCAGTTGTCG TCGTGGACCA CCTACACGGT CAGCGAGCGT GCACGCCCGG CCGCGATCGC CGAGAAGATC GGCGTCGATG CCGATACGCT GATGTCGGTC AACAAGATTC CGGCCGGCAT GCGCCTGAAG CCGGGCTCGA CGATCGTCGT GCCGCGCGGC AATGACGACG ACGAGGACAT CAGTGCCGAC GTCGCCGAAA ACGGCGCGCT CGCGATGGAG CCGGACGTCC CCGATACGCG CAAGATGCTG ATCCGCGTGC GCCGCAAGCA GTCGATGGCG GCGATCGCCG GCCGCTATGG CGTGTCGGTC GGCCAGTTGA AGGCGTGGAA CCGTACGCAC CGCGATCTCG CGATGCCGGG CCAGGCGCTC GTGCTGCACG TGCCGGTCGG CCGTTCGGTG CCGGCCGAGC CCGGTCCGGA GCGGATCGCG ACGTCGACGG GCGGTGCGCA CATCGAGCGC GCGAGCCTGG CGGTGGGCGG CAAGTCGCAC GGCGGCAAGC GCGGCGGCGC CAAGTCGTCG GCCCGGCCGG CGGCGAAGGC TGCGCCCGCG AAAGCCGCGC CGGCCAAGGC CGCCGCGCAC AAGGGCAAGA AGAAGTAA
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Protein sequence | MRLILSAMVV LLLAACASQP PVANNAADSQ ATSNYLRKSA TAKETVDVDK QSVGDLTTAD SDLWARIRRG FQMPDLQSDL VDMQTTWYTQ RPDYVQRMTE RSQKYLYHIV EELEARHMPT ELALLPFIES AYNPQALSVA KAAGMWQFMP GTGRTYNLKR NMWQDERRDV LASTSAALDY LSRLHDMFGD WYLALAAYNW GEGNVQRAIA RNQAAGLPTD YQNLRMPNET RNYVPKLQAV KNIIASPQQY GLTLPDIPNH PYFVTVTTSR DIDVAVAAKL ANLPLDEFRS LNPSFSKPVI LGATEPQILL PFDNASAFEK SLKAYNGQLS SWTTYTVSER ARPAAIAEKI GVDADTLMSV NKIPAGMRLK PGSTIVVPRG NDDDEDISAD VAENGALAME PDVPDTRKML IRVRRKQSMA AIAGRYGVSV GQLKAWNRTH RDLAMPGQAL VLHVPVGRSV PAEPGPERIA TSTGGAHIER ASLAVGGKSH GGKRGGAKSS ARPAAKAAPA KAAPAKAAAH KGKKK
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