Gene Bcenmc03_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1228 
Symbol 
ID6122906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1352421 
End bp1353332 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID641637802 
ProductLysR family transcriptional regulator 
Protein accessionYP_001764525 
Protein GI170732578 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.74553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.563903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGA TCGAACTGCG TCACCTGCGT TACTTCGTCG CCGTCGCCCA GGCCGGCAGC 
GTGATGGCCG GCGCCCGCGC GGCCGGCATC GTGCAGCCCG CGCTGTCGCG GCAGATCCGC
GAGCTGGAGG ACGCGATCGG CACGCCACTG CTGATCCGTC GCGCGACGGG CGTCACGCTC
ACCGCGGCCG GCACGAGCTT TCTGCACGAT GCCACCGGCC TGCTCGCGAT GCTGCAGGAC
AGCCGTGAGC GCGCGTTGCG CAGCGCGGCC GGCCAGCTCG GCGAACTGCG GCTCGGCGCG
CTGCCGAACT GCCTGCCGTT GGCGGTCGTC GCGAACGTCC TCAAAACGTT TCGCGATGCG
TGCCCGGACG TGAAACTGTC GATCGCGCCG ATGCTGTCCG CCGAACAGGC CAGCGCGCTG
ATGCGCGGCC AGCTCGACGC CGGAATCATG GCGTGGCGTC GCGAGGAAGC GCCGCACCTG
ACGGGCGTGC GGCTGCTGAG CGATCGCTTC GTGCTCGCGA TGCCCGCACC GTCGGACGGC
CGCTTCGTCG CGCCGCGCAC GCTGGCCGAC GTCGCGAACG AGCCGTTCGT CTGGTTCGAT
GCGCAACGTT CCGCCGCGCA CCACCGGTTC CTGATGACGC AGTGCCAGCA GGCCGGTTTC
ACGCCGCGCA TCGCGCAGAT CGGCAGCGAC ATCCCGACGC TGATCGGCCT CGTCGCGGTG
GGGATGGGTT GCGCGTTCGT GCCGGAAAGC GCATCGCCGA CCTGCCCGAG CACGGTTCGG
CTCGTCGCGC TCGACGAACT CGCGAGCCGC TTCGACATCG AGTTCGTGTT CGACGGCGCG
GCGACGACGC CGTCGCCCGT CGTCGCGCGG TTTCTCGCGG CGGTCCGCGA CGCGGCCGGC
GAACCGGGCT GA
 
Protein sequence
MRQIELRHLR YFVAVAQAGS VMAGARAAGI VQPALSRQIR ELEDAIGTPL LIRRATGVTL 
TAAGTSFLHD ATGLLAMLQD SRERALRSAA GQLGELRLGA LPNCLPLAVV ANVLKTFRDA
CPDVKLSIAP MLSAEQASAL MRGQLDAGIM AWRREEAPHL TGVRLLSDRF VLAMPAPSDG
RFVAPRTLAD VANEPFVWFD AQRSAAHHRF LMTQCQQAGF TPRIAQIGSD IPTLIGLVAV
GMGCAFVPES ASPTCPSTVR LVALDELASR FDIEFVFDGA ATTPSPVVAR FLAAVRDAAG
EPG