Gene Bcenmc03_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1220 
Symbol 
ID6122898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1341810 
End bp1342439 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content70% 
IMG OID641637794 
Productnucleoside-diphosphate-sugar epimerase-like protein 
Protein accessionYP_001764517 
Protein GI170732570 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGCTCGTCGG CGCGACCGGA CTCGTCGGGC GCCACGTCCT CGAAGTTGCG 
CTCGCCGACG CGCGGGTCGA TCAGGTGATC GTCCTCGCGC GTCGGCCGTT GTCGCCACAT
CCGAAGATGC GCGCGCTGGA AGTCGATTTC GACCATCTGC CCGACACGGC CGATTGGTGG
CACGCGGATG CGGTGATCTG CACGCTCGGC ACGACGATGC GGGCCGCCGG TTCGCAGGCG
GCCTTCCGGC GCGTCGATCA CGACTATCCG CTTGCGGTCG CGCGGCTCGC GCACCGGCAC
GGCACGCCGA CCTACGTGCT GAATTCCGCG CTCGGCGCTG ATGCCGGGTC GCGCATCTTC
TACAACCGCG TGAAGGGCGA AGTCGAGCAG GCGCTCGCCG GCGTCGGCTT CGATTCGCTC
ACGTACGTGC GACCGGGCCT GATCGGCGGC AGTCGCGACG AGTTCCGGTT CGGCGAGCGG
CTGTTCGTGT TCGCGCTGAG CGCCGTCGCG CCGGTGCTGC CGGCGAAGTG GCGCGTGAAT
CCCGCGCCGC GGATTGCGCG CGCGTTGCTC GACGCGGCGA TCGACGCACG GCCGGGCGTG
CAGGTCGTCG CGTCCGACCG GCTCGTCTGA
 
Protein sequence
MKLLLVGATG LVGRHVLEVA LADARVDQVI VLARRPLSPH PKMRALEVDF DHLPDTADWW 
HADAVICTLG TTMRAAGSQA AFRRVDHDYP LAVARLAHRH GTPTYVLNSA LGADAGSRIF
YNRVKGEVEQ ALAGVGFDSL TYVRPGLIGG SRDEFRFGER LFVFALSAVA PVLPAKWRVN
PAPRIARALL DAAIDARPGV QVVASDRLV