Gene Bcenmc03_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1190 
Symbol 
ID6122868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1310232 
End bp1310636 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content67% 
IMG OID641637764 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001764487 
Protein GI170732540 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.285712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.465318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTC GCTATACGCT CGATCCGGCC GAGGTCGAAT GGACGGCCGT GCGCGCGCAG 
GGCGCGGGCG GGCAGAACGT GAACAAGGTG TCGAGCGCGA TTCATCTGCG CTTCGACATT
CGCGCGTCGT CGCTGCCGCC GGTCCTCAAG GAGCGGCTGC TTGCGCTGTC CGACCAGCGC
ATCACGCGCG ACGGCATCGT CGTGATCAAG TCACAGGAAT ATCGGACGCA GGAGAAGAAC
CGCGAGGCCG CGCTGGCACG GCTCGATACG TTGATCGGCA GCGTCGCGTA CACGCCGCGT
GCCCGGGTCG CGACGCGGCC GACGCGTGCG TCGAAGGAAC GGCGGCTCGA GCACAAGTCG
CGCCGCAGCA CGGTGAAGTC GGGACGAGGG AAGGTGATCG ACTGA
 
Protein sequence
MMIRYTLDPA EVEWTAVRAQ GAGGQNVNKV SSAIHLRFDI RASSLPPVLK ERLLALSDQR 
ITRDGIVVIK SQEYRTQEKN REAALARLDT LIGSVAYTPR ARVATRPTRA SKERRLEHKS
RRSTVKSGRG KVID