| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1187 |
|---|
| Symbol | |
|---|
| ID | 6122865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1300875 |
|---|
| End bp | 1304213 |
|---|
| Gene Length | 3339 bp |
|---|
| Protein Length | 1112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641637761 |
|---|
| Product | exodeoxyribonuclease V, gamma subunit |
|---|
| Protein accession | YP_001764484 |
|---|
| Protein GI | 170732537 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1330] Exonuclease V gamma subunit |
|---|
| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.720814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.579184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCATC TCTTCTATTC GAACCGTCAC GAAACGCTGG CCGACGCGCT GCTCGAGGAT
CTGGCTGCGT TCCCGGCCCG CAACGGCCCG TGGGCGCCGC AACAGGTCAT CGTGCCGAGC
GCGGCGCTGC GCCGCCGTCT CGAGCTCGAC ATCGCCGCGC GCAATGGCGT GTGCGCGAAC
GTCGAGTTCA CCTATCTCGC GCAGTGGCTG TGGGCGCAGA TCGGCCGCGT GCTGACGGTG
CCGGCGCGCT CGCCGTTCGC ACCCGACCGG CTCGTGTGGC GCTGCTACCG GCTGTTCGCG
CAGGCGGCCG ATGGTGCGCC GTGGCTCGCG TCGCCGCGGC TCGCCGCGTA CCTGTCGGCC
TCCGATGATG CGATGCGCTA CGAACTGGCC CATCGCGTCG CGGCCGTGCT CGATCATTAC
CTGACCTATC GCCCCGAATG GCTGGCCGCG TGGCAGGCCG GCGAATCGGT GCTCGCGGGC
GACGCCGCGC CGCGCGGGAT CAGCGACGCC GCGCGCGACG ACGAGCGCTG GCAGGCCGCG
CTGTGGCGTG CGCTGCTCGC CGAGCTGAGC GACAGCGGCA CGCCGCCGGC ACACCGCTTC
CTCGTCGAAG CGCGCCATCT CGATGCCGAC GCGGTCGCGC GCGCCGACTG GCCCGAATCG
GTCAGCGTGT TCGCGCTGCC GACGATGCCG CCGCTGCACG TCGCGCTGTT GCGCGAACTG
TCGCGCTGGA TCGACGTGCG CGTCTACGCG CTGAACCCGT GCCGCGAATT CTGGTTCGAC
ATCGTGACCG CCGCGCATGC CGAGGCGCTC GATGCGGCAG GGCGGCGCGA CTATCAGGAA
GTCGGTCATC CGCTGCTCGC CGAATGGGGC CGGCAGACGC AGGCGCAACT GCACATGCTG
CACGAACTGA CCGAAAGCGC CGCGTCAGGC GATGCGTCGC GTTTCGTCGA GAATCCCGCG
CCCACCTGGC TCGCGCGCGT GCAGAACGCG ATCCTCGAAT TGCAGCCGGA GGTCGACATC
GGCGACACGC CGGTCGAGCG GGGGATCGAG GTGCATGTGT GCCACAGCCT CGCTCGCCAG
CTCGAGGTGC TGCACGACCG GCTGCTTGCC TGGTTCGACG CCGATGCGAG CCTGCAGCCG
TCCGACGTGC TTGTCGCGGT CGCCGATCTC GCCGCGGCCG GGCCGCTGAT CGACGCGGTG
TTCGGCACGG CCGGCGCCGG CGGCGCGCGG GTGCCGTACC GGATCACCGG CCTGCCGCCG
TCGCAGGCGA ACCCGGTCGC GCGCGTGCTG CTCGACTGGC TCGCGTTGCC GGAACGGCAG
GTCGGCGCGC CGGAGCTGGT CGAATGGCTG CGCGTGGATG CGGTGGCCGC GCGCTACGAC
ATCGACGCGG CCGCGCTCGA AACCGTGCAG ACCTGGCTCG CGGCCGCCGG CGCGCGGCGC
GGGCTGTCGC CGCGCGCGAG CGACGACGCG GCCGTGCCCG CGCCGCGCCA TACGTTCTCC
GATGCGCTCG CGCGCCTCTT TCTCGGCTAT GCGATGCCCG AAGGCGCGGC GCCGATCGGC
GCGTGGCTGC CGATCGAGGC GGCCACCGGC AGCGAGGCCG AACTGCTCGG CCGGCTCGCA
CGTTTCACCG ACGATCTCGA CGGCTTCGCG CGGCGGCTCG CCGAGTCGCA CACGCCGCGC
GGCTGGAGCG AACTGTTTGC CGACACGCTC GCGCGCTTCT TCGATTCGGG CGCTGCGTAT
GCCGATGCGC TGGCCGGCGT GCGCGACGCG CTCGACGCGA TGCTGGCCGC GATGACGGAA
GGTGCGCCGG ACGAGGCGTT GCCGGCGGCC GTCGTGCGCG CGGGGCTCGC CGCGGCGCTC
GACGATCCGG CCCGCGGCGG GGTGCCGTGG GGTGGCGTCA CGTTCTCGTC GCTGACGAGC
TTGCGCGGGC TGCCGTATCG CGTCGTCTGC CTGCTCGGGA TGGACGACGG CGTGCTGCCG
AGTCTCGCGC GCGCGGATGA ATTCGACCTG ATGGCCGTGC TGCCGAAGCT GGGCGACCGG
CAGCGTCGCG ACGACGAGCG CAATCTGTTT CTCGACCTGT TGCTCGCCGC ACGCGACCGC
CTGCTGATCG CCTATACGGG CCGCAGCATC CGCGACAATG CGCCGTTGCC GCCCGCGGCG
CTCGTCGACG AACTGCTCGA TCATCTGGCG ATCGTCACGG CCGGGCCCGG CGCCGCACCG
GATGCGGTCG ATGCCGCGCG GCGCGCGTTC ATCGTCGAAC ATCCGCTGCA ACCGTTCGCG
GCCGCGTACT TCCAACTGGG CAGCGAACTC GTTTCGTACG ATGCCGAGCG GGCGACACTC
GCGTCGCTGC TGGCCGCCGA AGCGTCGCGC GGCCAGCCGC GCGAGCAGCC GTTCTTCGCG
CAGCCGCTGC CGGCCGAGCC GGTCGAGCCC GTCGCGTTCA GCGAGTTCGA ACGTTTCTGG
CGGCATCCGG CGCGTGCGTT GCTGCGCGGC CGGCTCGGCA TCGTGCTGAC CGACGCGCAG
GCGGAACTGC TCGATACCGA GCCATTCGCG CTGGACTTTG CCGGTAGCGA CGCGCTGGCC
GAGCGCGTGC TGCCGCTCCT GATCGAAGCA GGCGAGGGTG GCGTGCACGA TCACGCGCTG
CGCATTGCGG ACGCGAGCCC CGAACTGCCC GGCGGCGCGA CGGGCGCGGT GTGGCGCGAC
CAGGCGCTCG GTTCGATGAC GCAGCTTGCG TCGAACGTGC GCCGTGCGCT GGCCGATGGC
ATCGAGCGGC GGCCGTTCTC GCTCCTTGTC GTACCGAAGT GGCCCGACAC CGAGCAGGCG
CTGTTCGGCG CCGACGACGC GATGCTGGCG GCCGACGCGG TGAGCGCGCC GCTCGAATTG
CACGGCACGC TGAACCGGCT GACGCCGGCC GGGCAGGTCA TCTACCGCTA TGCGCGGCCG
AGCGCGCGCG ACTACCTGTC CGCGTGGCTC GCGCATCTCG TCTACTGTGC GATCGAGCCC
GGCGGCCCGC GCCGCACGCT GTGGTTCGGC AGCGGCGGTG CGTTCGAGCT GACGCCCGTC
GCGGCGCCGC TCGAACGGCT CGCGCCGCTG GCCGCGCTGT TTCGCGCGGG GCGGCGCATG
CCGCTGCGGT TTTTCCCGCG CAGTGCGTGG GCGCGAGTAT CCGACGGCGA GGCCAAGGCC
GCGAGCGTGT GGATCAACGA ACGGGTCGTG AGCGAGGCCG ACGATCCGGC CATCGCGATC
GCATGGCGCG GCGCGCATCC GTCGCTCGAC GAGCCGTTCG GCACGCTCGC GCGGCTCGTG
TTCGAGCCGC TCGTCGAGCA TCTGAAGGAG GTCGCATGA
|
|---|
| Protein sequence | MLHLFYSNRH ETLADALLED LAAFPARNGP WAPQQVIVPS AALRRRLELD IAARNGVCAN
VEFTYLAQWL WAQIGRVLTV PARSPFAPDR LVWRCYRLFA QAADGAPWLA SPRLAAYLSA
SDDAMRYELA HRVAAVLDHY LTYRPEWLAA WQAGESVLAG DAAPRGISDA ARDDERWQAA
LWRALLAELS DSGTPPAHRF LVEARHLDAD AVARADWPES VSVFALPTMP PLHVALLREL
SRWIDVRVYA LNPCREFWFD IVTAAHAEAL DAAGRRDYQE VGHPLLAEWG RQTQAQLHML
HELTESAASG DASRFVENPA PTWLARVQNA ILELQPEVDI GDTPVERGIE VHVCHSLARQ
LEVLHDRLLA WFDADASLQP SDVLVAVADL AAAGPLIDAV FGTAGAGGAR VPYRITGLPP
SQANPVARVL LDWLALPERQ VGAPELVEWL RVDAVAARYD IDAAALETVQ TWLAAAGARR
GLSPRASDDA AVPAPRHTFS DALARLFLGY AMPEGAAPIG AWLPIEAATG SEAELLGRLA
RFTDDLDGFA RRLAESHTPR GWSELFADTL ARFFDSGAAY ADALAGVRDA LDAMLAAMTE
GAPDEALPAA VVRAGLAAAL DDPARGGVPW GGVTFSSLTS LRGLPYRVVC LLGMDDGVLP
SLARADEFDL MAVLPKLGDR QRRDDERNLF LDLLLAARDR LLIAYTGRSI RDNAPLPPAA
LVDELLDHLA IVTAGPGAAP DAVDAARRAF IVEHPLQPFA AAYFQLGSEL VSYDAERATL
ASLLAAEASR GQPREQPFFA QPLPAEPVEP VAFSEFERFW RHPARALLRG RLGIVLTDAQ
AELLDTEPFA LDFAGSDALA ERVLPLLIEA GEGGVHDHAL RIADASPELP GGATGAVWRD
QALGSMTQLA SNVRRALADG IERRPFSLLV VPKWPDTEQA LFGADDAMLA ADAVSAPLEL
HGTLNRLTPA GQVIYRYARP SARDYLSAWL AHLVYCAIEP GGPRRTLWFG SGGAFELTPV
AAPLERLAPL AALFRAGRRM PLRFFPRSAW ARVSDGEAKA ASVWINERVV SEADDPAIAI
AWRGAHPSLD EPFGTLARLV FEPLVEHLKE VA
|
|---|
| |